Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2908 |
Symbol | |
ID | 8359070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3587058 |
End bp | 3587798 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965089 |
Product | histidine kinase |
Protein accession | YP_003122588 |
Protein GI | 256421935 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.108136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACA AAATATTTTA TATCACCATA TTTATCTCGC TGCTGATAGC CATCATCATT CTGTTTTTCG TCATCTCTAT TGTCTTGTAT CATCGCCGGT ACATACAGCT GCAACGCGAA CGTATCGTTG CGGAAATTAC CATCCTGGAG AATGAAAGGA AAAGGATTGC CGCTGACCTG CATGACAGCA TGGGCCCTTT ATTATCTACT ATCAAACTCA ATATTCATAG TATCGAGGTG ACAGATGAAA GGGACCATCA GATCATTGTC CGCTCTTCCG GTTATATCGA TGAGGTGATC AAAGGACTGA GGCAGATATC ACACAACCTG CTGCCAGCGA CACTTGAGCG TAAGGGGCTT ACGGAGGCGT TACATGAATT CATCCGCCAG TTGTCAGGTA AACAGGATCT TGAAATTAAG TTTCATACTT CCGGAAAGAT CGACATTGCG CCTGAAAAAC AGATCCATAT CTTCCGTATT ATACAGGAGA TCACGCACAA TACCCTGAAA CACGCCAAAG CCACACAATT ACAGATTGTG CTGACGAGAG AAAACGGATT CTACCTTGTA CTGGTGAAGG AGAACGGGAT CGGGTTTGAT GTAAAAAAAG CCAGAAATGA ATCTGCCGGA CTTGGTATGA AAAGTCTGGC GATCCGTACA GACATCCTTC GGGGCTCACT GTCTATCGAT TCTGTACCGG GCCAGGGTAC CAACTATTTC GTAAAAATTC CGGTGGGATA A
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Protein sequence | MDDKIFYITI FISLLIAIII LFFVISIVLY HRRYIQLQRE RIVAEITILE NERKRIAADL HDSMGPLLST IKLNIHSIEV TDERDHQIIV RSSGYIDEVI KGLRQISHNL LPATLERKGL TEALHEFIRQ LSGKQDLEIK FHTSGKIDIA PEKQIHIFRI IQEITHNTLK HAKATQLQIV LTRENGFYLV LVKENGIGFD VKKARNESAG LGMKSLAIRT DILRGSLSID SVPGQGTNYF VKIPVG
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