Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2859 |
Symbol | |
ID | 8359020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3536114 |
End bp | 3537349 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965039 |
Product | hypothetical protein |
Protein accession | YP_003122539 |
Protein GI | 256421886 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00104308 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGA AGAAAACAAA TTATCATATA GTCGCCATAC TGCTGATCGT GTTGACAGCA GTTACCTTGA GCGCCTGCAA TAAAGACGAT GTTTACCGGC AACCGGATGC TACCGGTAAG AATAAACCAG GGCCGGTCAC CAATGTAAGA GTGACCAACT ACAATGGAGC AGCAGTTGTT AAATACGATC TGCCCGGTGA CCAGGACCTG CTGTATGTAG TGGCTAATTA TAGTATTCGG GATGGTGTCA ACAGGGAGAT CAAATCAAGT TATTTCTTCG ATACCCTCCG CCTGGAAGGC TTCCATGACA GTAAGGAGTA TACAGTGACA CTGAAGGCAG TGACCCGTTC TAATATTGCT TCCGATCCGG TAACGGTTGT GGTACATCCT GATACCCCTT ATTACGCATT GATCAGGAAA TCACTTAAAA TAGGCAGTGA CTATGGTGGG ATCAATATAC AGGCGGCTAA TACGGCAAAG AATGCAATTG CCATCAATAC TCTTACTATA GATCCGGTGA CCGGCAATTT TGCAATAGCC AACGAAAACT ATACAAATCT GGCCGCCATT AACTATTCAT TAAGAGGTTA TAAGCCTGAG CCCACCAAAT TTGGTGTTTA TATATCCGAC AGATACGGCA ATATTTCTGA TACGATGGTC GTGACAATTA CCCCCGGTTA TGAAGAAATA CTGAATAAAA GGAACTTCTT TCCTTACCTC ATGCCAAGTG ATGCCGTAAT CGGTTATGGT GGTGTCGTAC AGAACATGTG GGATGGTAAT ATCACAGAAG ATAACAGTGC TAATGCCTGG CAGACGACTA TCGGTACCAG TCAGCGACTG ATGCAATGTT CTTTTGGTAT CGGCAGAAGT TATACGCTGA CCCATTTTAT GATGTATTTC AGGGACTATG GGGCCAACAA TCCGAAAAAC TTTACCATCT ATGGTTCTAA CGTTGAAAAC CCTGCAGATG CGACCACGCC CGGCGGTGTA CCACAGGGTA CACAGAGCGG TGACTGGATA TGCCTCGGCA ATTTCCGGGT ACCGGATCCT CCTTCCGGTT TGCCACAGGG ACAAACCAAT GCGGCTGACA GAGCCTATGT AAATAACGGG ATTGATTTTA GTATGCCGAC AGGTATCCCG CCAGTAAAGT ACGTCCGGAT TGTCGTGAAA GATACCTGGT TCGGACTTGA TTACACGATT ATCAGAGAAG TCACCTTTTC CGGAATTCCG CAATAA
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Protein sequence | MNWKKTNYHI VAILLIVLTA VTLSACNKDD VYRQPDATGK NKPGPVTNVR VTNYNGAAVV KYDLPGDQDL LYVVANYSIR DGVNREIKSS YFFDTLRLEG FHDSKEYTVT LKAVTRSNIA SDPVTVVVHP DTPYYALIRK SLKIGSDYGG INIQAANTAK NAIAINTLTI DPVTGNFAIA NENYTNLAAI NYSLRGYKPE PTKFGVYISD RYGNISDTMV VTITPGYEEI LNKRNFFPYL MPSDAVIGYG GVVQNMWDGN ITEDNSANAW QTTIGTSQRL MQCSFGIGRS YTLTHFMMYF RDYGANNPKN FTIYGSNVEN PADATTPGGV PQGTQSGDWI CLGNFRVPDP PSGLPQGQTN AADRAYVNNG IDFSMPTGIP PVKYVRIVVK DTWFGLDYTI IREVTFSGIP Q
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