Gene Cpin_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2859 
Symbol 
ID8359020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3536114 
End bp3537349 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content45% 
IMG OID644965039 
Producthypothetical protein 
Protein accessionYP_003122539 
Protein GI256421886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00104308 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA AGAAAACAAA TTATCATATA GTCGCCATAC TGCTGATCGT GTTGACAGCA 
GTTACCTTGA GCGCCTGCAA TAAAGACGAT GTTTACCGGC AACCGGATGC TACCGGTAAG
AATAAACCAG GGCCGGTCAC CAATGTAAGA GTGACCAACT ACAATGGAGC AGCAGTTGTT
AAATACGATC TGCCCGGTGA CCAGGACCTG CTGTATGTAG TGGCTAATTA TAGTATTCGG
GATGGTGTCA ACAGGGAGAT CAAATCAAGT TATTTCTTCG ATACCCTCCG CCTGGAAGGC
TTCCATGACA GTAAGGAGTA TACAGTGACA CTGAAGGCAG TGACCCGTTC TAATATTGCT
TCCGATCCGG TAACGGTTGT GGTACATCCT GATACCCCTT ATTACGCATT GATCAGGAAA
TCACTTAAAA TAGGCAGTGA CTATGGTGGG ATCAATATAC AGGCGGCTAA TACGGCAAAG
AATGCAATTG CCATCAATAC TCTTACTATA GATCCGGTGA CCGGCAATTT TGCAATAGCC
AACGAAAACT ATACAAATCT GGCCGCCATT AACTATTCAT TAAGAGGTTA TAAGCCTGAG
CCCACCAAAT TTGGTGTTTA TATATCCGAC AGATACGGCA ATATTTCTGA TACGATGGTC
GTGACAATTA CCCCCGGTTA TGAAGAAATA CTGAATAAAA GGAACTTCTT TCCTTACCTC
ATGCCAAGTG ATGCCGTAAT CGGTTATGGT GGTGTCGTAC AGAACATGTG GGATGGTAAT
ATCACAGAAG ATAACAGTGC TAATGCCTGG CAGACGACTA TCGGTACCAG TCAGCGACTG
ATGCAATGTT CTTTTGGTAT CGGCAGAAGT TATACGCTGA CCCATTTTAT GATGTATTTC
AGGGACTATG GGGCCAACAA TCCGAAAAAC TTTACCATCT ATGGTTCTAA CGTTGAAAAC
CCTGCAGATG CGACCACGCC CGGCGGTGTA CCACAGGGTA CACAGAGCGG TGACTGGATA
TGCCTCGGCA ATTTCCGGGT ACCGGATCCT CCTTCCGGTT TGCCACAGGG ACAAACCAAT
GCGGCTGACA GAGCCTATGT AAATAACGGG ATTGATTTTA GTATGCCGAC AGGTATCCCG
CCAGTAAAGT ACGTCCGGAT TGTCGTGAAA GATACCTGGT TCGGACTTGA TTACACGATT
ATCAGAGAAG TCACCTTTTC CGGAATTCCG CAATAA
 
Protein sequence
MNWKKTNYHI VAILLIVLTA VTLSACNKDD VYRQPDATGK NKPGPVTNVR VTNYNGAAVV 
KYDLPGDQDL LYVVANYSIR DGVNREIKSS YFFDTLRLEG FHDSKEYTVT LKAVTRSNIA
SDPVTVVVHP DTPYYALIRK SLKIGSDYGG INIQAANTAK NAIAINTLTI DPVTGNFAIA
NENYTNLAAI NYSLRGYKPE PTKFGVYISD RYGNISDTMV VTITPGYEEI LNKRNFFPYL
MPSDAVIGYG GVVQNMWDGN ITEDNSANAW QTTIGTSQRL MQCSFGIGRS YTLTHFMMYF
RDYGANNPKN FTIYGSNVEN PADATTPGGV PQGTQSGDWI CLGNFRVPDP PSGLPQGQTN
AADRAYVNNG IDFSMPTGIP PVKYVRIVVK DTWFGLDYTI IREVTFSGIP Q