Gene Cpin_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2809 
Symbol 
ID8358970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3461737 
End bp3462645 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content47% 
IMG OID644964989 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003122489 
Protein GI256421836 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACACC TGATGATTCT TACAGCACTA ATCCCATTTT TATCCGTTAG CACAATGAAA 
GCACAAATGC CTGAAGCAAA ATTTATAGAG ATCGAAAGTA CAAAGCTTTG TTATTATGAA
CAAGGTCAGG GAGACGTCAT TCTGTTATTG CATGGCTGGC CACAGACCTC CTACGTCTGG
CGGAAAGTAA TGCCATTACT GGCGAAGCAT AACAGGGTTA TTGCAGTGGA CCTGCCCGGA
CTGGGTAACA GTGGTCTGGC GCCGGCTTAT AATACAAAAG CTGTAGCGGC ATTGATCAGT
CGTTTTATCA GCCAGCTCCA CATCAGCAAG GTACACCTGG TATCTCATGA TGTAGGCAGC
TGGGTGGCCG TATCATTTGC ATTGAACCAT GAAGCACAGC TCAATACCCT GACAGTCATC
GATGCAGCAA TACCCGGACT GATGTCAGAA GCCGTATTCA AACCGGAAAA TGCGCAGAAA
ATCTGGCAGT TCTATTTCCA TGCGGTAAGC GATATTCCGG AGTTACTGGT AGAAGGAAAG
GAGAAAGCGT ATTTATCCTG GTATTTCTCC AACAAATCCT TTGTTAAAAC GGCCATCAAT
GAGCAGGACC AGGACGAATA TGTACGGGCT TATACGGGTA TAGAACGTTT GAAACAGGGT
TTTGCCTATT ACAGGGCATT TACAGCCAGT GCACAGCATA ACAGGGCAGA TCTGCACCGT
TTACAGGTAC CGGTACTGGC CCTGGGCGGA CAATATGCAC TTGGCGAACA GATAGGCAAT
GCTTTACAAC AGCTGGCAAC GCCGGAAGTG ATCGTGGTGA AAGATGCAGG GCATTATGTG
CCGGAAGAGC AACCCGGGGA AACAGTACGT TGTATCAGGA ACATGATAGA CCGTTTTGAA
GCAAAGTAA
 
Protein sequence
MRHLMILTAL IPFLSVSTMK AQMPEAKFIE IESTKLCYYE QGQGDVILLL HGWPQTSYVW 
RKVMPLLAKH NRVIAVDLPG LGNSGLAPAY NTKAVAALIS RFISQLHISK VHLVSHDVGS
WVAVSFALNH EAQLNTLTVI DAAIPGLMSE AVFKPENAQK IWQFYFHAVS DIPELLVEGK
EKAYLSWYFS NKSFVKTAIN EQDQDEYVRA YTGIERLKQG FAYYRAFTAS AQHNRADLHR
LQVPVLALGG QYALGEQIGN ALQQLATPEV IVVKDAGHYV PEEQPGETVR CIRNMIDRFE
AK