Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2807 |
Symbol | |
ID | 8358968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3459570 |
End bp | 3460496 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644964987 |
Product | HtrA2 peptidase |
Protein accession | YP_003122487 |
Protein GI | 256421834 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGCAT ATTCTCAACT CATCATTGAC GCTGTCGAGA AAGCCAGTCC CGCAGTTGTC AAAATAGAAC GGTTGGAACG TCGTGGTAAC CAGGAAACGG TATCCGGAAC AGGATCCGGA TTTCTCTTCT CGTCTGACGG TTACCTGTTC ACCAACAGTC ACGTCATCAA TGGCGCCACC CGTCTGAAAG TGCGGCTGCA GGATGGACGT GAATATACGG CTACCCTGGC AGGGCAGGAC GTGCCTACCG ATCTGGCCAT ATTGAAGATT GACGCAGGGG AGTTTGCGAC GGTAAAACTG GGCGATTCCG ATGATCTGAA AATCGGACAA CTGGCCATTG CCATCGGGAA CCCACTGGGC TTCCAGCATA CGGTAACTGC CGGTGTGATC AGTGCAGTCG GCAGGTCGCT ACAAGGACAA AACGGCGTTA CAATGGATGC AATGATACAG ACAGATGCAG CGCTGAATCC CGGCAATTCC GGCGGACCGC TTATCAACAG TGAAGGCGAA GTAATCGGTG TCAATACTGC CGTGATTATG GGTGCACAGG GACTCTGCTT TGCGATCAGT ATCAATACCG CCAAAGCTAT CGCCAATCAG CTGATCCGTT TCGGGAAAGT AAAACGGGCC TATATCGGCG TTGCCATGCA ACAGATAGAC CTGGTACCCC GTTTACGCAG TATTCACCAG ATCCGGAACA AACAGGCGCT GTTTGTATCT AATGTAGAAC GTTACAGTCC GGCGGCCAAA GCCGGTATCC TGAATGGCGA CATTATTTTC CAGTTCAATG ACCACCTGGT AGAAACAGCC GACCAGTTCT TCAAAATGCT CACTTCTGAT AAGATCGGAC AGTTCCAGTA TATCAACGTG ATCAGGGATA ATACCCTCCT GGAGCTACGC ATTACACCTG TTGAAAGAGG CGACTGA
|
Protein sequence | MDAYSQLIID AVEKASPAVV KIERLERRGN QETVSGTGSG FLFSSDGYLF TNSHVINGAT RLKVRLQDGR EYTATLAGQD VPTDLAILKI DAGEFATVKL GDSDDLKIGQ LAIAIGNPLG FQHTVTAGVI SAVGRSLQGQ NGVTMDAMIQ TDAALNPGNS GGPLINSEGE VIGVNTAVIM GAQGLCFAIS INTAKAIANQ LIRFGKVKRA YIGVAMQQID LVPRLRSIHQ IRNKQALFVS NVERYSPAAK AGILNGDIIF QFNDHLVETA DQFFKMLTSD KIGQFQYINV IRDNTLLELR ITPVERGD
|
| |