Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2782 |
Symbol | |
ID | 8358943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3424740 |
End bp | 3425621 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964962 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003122462 |
Protein GI | 256421809 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0157891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAATA ATGTATTGAT ACCCGTTTAC GACTATGCCG ACGTCAACAG GCCTGGTAAT CCTGTGAGAG GATTTCATAT TGACCGTACA ACCTATCTGG TACAACCTGA AGATGTGTCT GAGCCGCACA GACGTTCCAA TTACAGCCTT ACGTTGTTAT TATCCGGCGA AAGCATACAA TATATAGACT TCGAAAAATA TACCGTGAAA GCACCGGCAC TGATCATGTT ATCTCCTGAT CAGATCTACC GGTATACCGG TGATAGCCTG TCTGAAATTG TGAACATTTC CTTCTCTCCG GAATTTTTGC TGCCAGAAAC ATCTGCCAGT GGAATGGTGT GCTGGTCATG CGTATTTGAA AAAGCGATTG TGCCACTTAC CGACGGACAG CTCAAAGAGC TGCTGGGCTT TGCACGCCTC ATGCTCAGAG AAACGGAAAA TCCGCAGCCA CTCAGTGACC TGATCATCCG TAGTCAGCTG AAATCGCTGA TGGCCGCTAC CGCCAGACTG CCGCAACTCG ATATCGCCTC TATCCAGTCG GATACCTTAC CTAACCGTAT CGTCAGACAA TTCAATGAAC TGTCCGACAT CCATTATAAA GATAAAACAC AGGTAGCCCA TTACGCAGAA CTGATGTTTG TAACGCCAGG TCACCTGAAT GACACGATTA AGTCCGCATT AGGGAAGACC GCTAAACAAA TTATAGACGA AAAACGTATT ACTGAAGCAA AGCGGTTATT GTATTGGGGT GAACATACAA TTAAAGAGAT TGCAGGACAA CTGAACTTTG AAGATGACGG TTATTTTAAT CGCTTCTTTA AAAAACATAC AGGTGCAACA CCTGCTTCTT TTCAACGTAG CATCCGTGAA AAGTACAATT AA
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Protein sequence | MRNNVLIPVY DYADVNRPGN PVRGFHIDRT TYLVQPEDVS EPHRRSNYSL TLLLSGESIQ YIDFEKYTVK APALIMLSPD QIYRYTGDSL SEIVNISFSP EFLLPETSAS GMVCWSCVFE KAIVPLTDGQ LKELLGFARL MLRETENPQP LSDLIIRSQL KSLMAATARL PQLDIASIQS DTLPNRIVRQ FNELSDIHYK DKTQVAHYAE LMFVTPGHLN DTIKSALGKT AKQIIDEKRI TEAKRLLYWG EHTIKEIAGQ LNFEDDGYFN RFFKKHTGAT PASFQRSIRE KYN
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