Gene Cpin_2781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2781 
Symbol 
ID8358942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3424018 
End bp3424458 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content47% 
IMG OID644964961 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003122461 
Protein GI256421808 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0129977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC CGATGATGTG TAGTACCATC AGTCACCTGC TGACGCAGAT CTGCAAGGTA 
CACAGGAATA AAGGCAACCA GATGCTGGCT GCCCATCAGC TCCACGCCGG TCAGGAGCAC
TTCCTGGCGC AGCTGTTGTG TGGGGGGCCT ATGACGATGA ATGAACTCAC GGAAAATCTG
GAAGTAACAC CCGCAACTGT AACACGAACA GCCGAACGAC TGGAGAAAAA CGGGTTTCTC
ACAAAAGAAA AATGTAATAA CGATCAGCGG GTTGTGAGAG TCAGCCTGAC TGATAAAGGA
AAAGAAGCAG CCACCGATAT AATAGATACT ACCTGGAATA AGCTGGAACA GCAGATGGTA
AAAAACATGA GTACAGAAGA AAAGGTATTG CTCAGACGAC TGCTAATGCA GGTATTGGAA
AACATAGAAG AGGAAGAATA G
 
Protein sequence
MNRPMMCSTI SHLLTQICKV HRNKGNQMLA AHQLHAGQEH FLAQLLCGGP MTMNELTENL 
EVTPATVTRT AERLEKNGFL TKEKCNNDQR VVRVSLTDKG KEAATDIIDT TWNKLEQQMV
KNMSTEEKVL LRRLLMQVLE NIEEEE