Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2738 |
Symbol | |
ID | 8358899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3353000 |
End bp | 3355042 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644964918 |
Product | protein of unknown function DUF1680 |
Protein accession | YP_003122418 |
Protein GI | 256421765 |
COG category | [S] Function unknown |
COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0391777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAC CAGATAAAAT CCTGCTGCTG ATCGTCCTTA CGCTGGCATC CTGTGTATCC TTTGCGCAGA AAGGACTGAT CAACACCAGC GCTAGTCCAT ACGCACGTTT ACAGGATGTT GACATGGGCA GCGTACAATG GACGAAAGGC TTCTGGGCAG AACGCTACGA AGTATGTAAA AACACCATGG TGCCCGCACT CTGGAAAACT TACCATGATG CGGAGAAATG CCATTCCTTC AAAAACTTTG AAATAGCCGC CGGACTAGAT ACCGGCACTT TCGTTGGTCC CTCTTTCCAT GACGGTGATT TCTACAAAAC ACTGGAAGCG GTCGCCGGTT TATATGCCGT TACCAAAGAT CCTGCATTGG ACCGCATGAT GGACGAAGCC ATTGCCGTCA TTGCCAAGGC ACAGCGAAAG GATGGTTATG TCTACACCAA ATCCATCATC GAACAACAAC AAACCGGTAA ACAACATCTT TTTGACGATA AACTCAGTTT CGAAGCCTAT AATTTCGGTC ACCTGATGAC AGCGGCCTGT GTCCACTACA GAGCAACCGG CAAAACCAAT CTGCTGGAGG TGGCAAAGAA AGCGACCGAT TTCCTGATAG GCTTTTACAA TACTGCCAGT CCTGAGCAGG CCCGTAATGC GATCTGTCCG TCTCACTACA TGGGTATCAT AGAACTTTAC AGGACCACCA GGGACAAAAA GTACCTGGCA CTTGCCCGTA AACTTATTGA CATCCGCGGA CTAACACCAG GTACGGACGA CAATTCCGAT CGTGTCCCTT TCCGCGACAT GAAAAGAATA GCGGGACATG CAGTAAGAGC TAATTACCTG TTGGCCGGCG TAGCAGACGT ATACGCTGAA ACCGGCGACA CCTCCTTATT ACATACCCTC AACCTCCTCT GGGATGACGT TATTAACAAA AAGATGTATG TAACTGGTGG TTGTGGTGCT TTATATGACG GGGTATCCGT AGATGGCATT TCCTACAATC CTGACACGGT ACAGAAGGTA CATCAGTCTT ACGGCAGGAA TTACCAGTTA CCCAACTTAT TTGCCCACAA TGAAACCTGC GCCAACATCG GTAACCTGTT ATGGAACCGT CGTATGCTTG AACTTACCGG AGATGCAAAG TATGGCGATA TCGTAGAACT CACCCTTTAC AACAGTATCC TGAGTGGTGT GAGTATGGAC GGCGCAGACT TTTTCTACAC AAACCCTTTA GCTGCTTCCC GCGATTTTCC CTACCAGCTA CGCTGGATGG GTGGCCGGCA GCCTTATATT GCTTTATCTA ACTGTTGTCC CCCGAATACG GTCCGCACCA TCGCTGAGGT CAGCAACTAC TTTTACAGTC TGGATGATAA AGGTATCTAC ATCGACCTAT ACGGCGGCAA CCAGCTCAAG ACGACACTCA AGGACGGCAG CACCCTCAGT CTGGAACAAG AAACCGACTA CCCCTGGGAT GGTACCATCA ATATCACCAT CAAGGACGCA CCTGCTCACC CTTTTGACAT TGCCCTCCGT ATACCCGGCT GGTGCCAGCG GGCCGGCATC ACCATCAACG GTAAACCTGT TGGTCAAACA GCCACTCCAT CCATCACCCC CGCTTCCTAT CACAAACTGA ACCGCCAATG GAAGTCCGGA GACAAGATCA CCCTCACCCT CGACATGCCG GCCACCCTGA TCACTGCCAA TCCCCTTGTA GAGGAGACAC GCAACCAGGT CGCCGTCAAA AGAGGTCCGG TCGTATACTG CCTTGAATCC CCCGATTTAA AGGACCAGTC CCTGACCAAC ATCCTGATCC CCTCCAACAT CCACTTTGAG CCCCGCTCTA TGAAAATCGC AAACGGCCGC ATTACAGCCC TTGACGGAGT CGCCCGTCTC CTGATCACCA ATAACCAGAA TAAGGCGCTC TATCAGCCCC TAAATGACGA ATCCCGCCCC CAGGCCATCA CTTTGATTCC CTATTACGCC TGGTCAAACA GAGGGCAGAG TGACATGAGC ATCTGGTTAC CAGTAGCGAT GATGTTAAAA TAG
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Protein sequence | MQKPDKILLL IVLTLASCVS FAQKGLINTS ASPYARLQDV DMGSVQWTKG FWAERYEVCK NTMVPALWKT YHDAEKCHSF KNFEIAAGLD TGTFVGPSFH DGDFYKTLEA VAGLYAVTKD PALDRMMDEA IAVIAKAQRK DGYVYTKSII EQQQTGKQHL FDDKLSFEAY NFGHLMTAAC VHYRATGKTN LLEVAKKATD FLIGFYNTAS PEQARNAICP SHYMGIIELY RTTRDKKYLA LARKLIDIRG LTPGTDDNSD RVPFRDMKRI AGHAVRANYL LAGVADVYAE TGDTSLLHTL NLLWDDVINK KMYVTGGCGA LYDGVSVDGI SYNPDTVQKV HQSYGRNYQL PNLFAHNETC ANIGNLLWNR RMLELTGDAK YGDIVELTLY NSILSGVSMD GADFFYTNPL AASRDFPYQL RWMGGRQPYI ALSNCCPPNT VRTIAEVSNY FYSLDDKGIY IDLYGGNQLK TTLKDGSTLS LEQETDYPWD GTINITIKDA PAHPFDIALR IPGWCQRAGI TINGKPVGQT ATPSITPASY HKLNRQWKSG DKITLTLDMP ATLITANPLV EETRNQVAVK RGPVVYCLES PDLKDQSLTN ILIPSNIHFE PRSMKIANGR ITALDGVARL LITNNQNKAL YQPLNDESRP QAITLIPYYA WSNRGQSDMS IWLPVAMMLK
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