Gene Cpin_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2685 
Symbol 
ID8358845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3279756 
End bp3280280 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content46% 
IMG OID644964867 
ProductYceI family protein 
Protein accessionYP_003122368 
Protein GI256421715 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC AAAGTAAAAT CAGCTGGAAA ATTGATAACG GACACTCCTC TGTAGGATTC 
AAGATACGAC ATATGGCCAT CGCCAATGTA AGCGGTGCAT TCCTGGACTT TGAAGGCCAG
GTGTACAGTA CATCGCCGGA TAGCTTTGAA GGAGCGGCTG TTGATGTTGA GATCAGGGTT
GATAGTCTTA ATACCAATCA TAGTGAACGG GATACACACC TCCGGTCCGA ACTATTTTTT
GACGCAGCAA AATATCCTGT CATCCGTTTT AAGGGCATAT TGCGTGGCGA TCAACTCAGT
GGTGAGCTAA CCATGTGTGC TATTACAAGG AATGTTGTAT TGGAAGCCAA CCTGATGGGA
TCAGGACAGG GGCGTTTCGG AGAGATGCGG GCAGGGTTTG AATTAAACGG AAAGATCAAC
AGGAAAGATT TTGGTCTGAC ATGGAGCATG CTGACGGAAG CAGGCGGCCT GATCGTTGGT
GAAGAAGTGA AACTGGATAT GAATATTGAG CTGGTCCGAT CTTAA
 
Protein sequence
MNDQSKISWK IDNGHSSVGF KIRHMAIANV SGAFLDFEGQ VYSTSPDSFE GAAVDVEIRV 
DSLNTNHSER DTHLRSELFF DAAKYPVIRF KGILRGDQLS GELTMCAITR NVVLEANLMG
SGQGRFGEMR AGFELNGKIN RKDFGLTWSM LTEAGGLIVG EEVKLDMNIE LVRS