Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2673 |
Symbol | |
ID | 8358833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3269369 |
End bp | 3269950 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644964855 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003122356 |
Protein GI | 256421703 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGAACG AATACACACA TAATGATACC GACCAGGAAC TGCTCAGTCT TATCAAAACA GGGTCAGAAA TAGCATTTCA GCAATTATTT CAACGACATT GGGAAAAGCT GTTCGTATCC GCCAGTAAGA AACTGGGCGA CCAGGAACTG GCGCAGGAAC TTGTGCATGA CTTGTTCCTG GATCTCTGGC GACGCAGGGA AGAACTTGCA ATAGTGAATC TTCCGGCATA CCTCGGAAAG GCCCTCCAAT ACCGCATTAT CAATAAACTG ATTTCTAAAA AAGATAAGTT CTTCTTTGAG TTACTGGAAA ATACAGAAGA ATCGCTTTAC AAAGCAGATC AGGCCCTGCT GGAAAAAGAC CTGACTGCTC TGATCATATC GTGGGCAGAA ATACTGCCGG AAAGACGGCG TCAGATATTT ATACAATATT ATCTCCACCA CCTCACTACC CTTGAAATTG CCGATAATCT CAGGATATCC CAGAAAACGG TACAAAACCA GCTTAGCATC TCTATACAGG ATTTAAAGGC ACATTTCGGC CATTTGCTTA TACTTCTGGT CCTGCTGGAC GAAACTTTGT AA
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Protein sequence | MVNEYTHNDT DQELLSLIKT GSEIAFQQLF QRHWEKLFVS ASKKLGDQEL AQELVHDLFL DLWRRREELA IVNLPAYLGK ALQYRIINKL ISKKDKFFFE LLENTEESLY KADQALLEKD LTALIISWAE ILPERRRQIF IQYYLHHLTT LEIADNLRIS QKTVQNQLSI SIQDLKAHFG HLLILLVLLD ETL
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