Gene Cpin_2658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2658 
Symbol 
ID8358818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3246449 
End bp3247723 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content44% 
IMG OID644964840 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003122341 
Protein GI256421688 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CCAGTATATT ATTCATCACC CTACAGCTCC TGGCGGGATG GCAGGCGAAT 
GCACAGCACA AGGATGCGCT GAACGCCCGT TTCAATACCA TGACCAGGGA AACGAGTCCT
GAAAAGAATG TAGCGGCCAT CGCTGCCCTT ATAAAAGCGT TTAAACTTGA TACCATTAAA
GACGCAGGCG ATATTGACAT CATGAAGGGG ATCACTGCAC TGACCTTTCT TAAAGTAAAA
GACTTTCCTC ATTTTGAAGT TTATATCAGC CAGATAAAGA ATCCGTTTAA CCAGACTTCT
TATCTGAATA TGGCCGTGAA TGAGCTGATT AATAATAAAA CAAGTCTGAC ATATGCGGAA
CTAACGGCGA AAAAGACGGT TGATTTGTAC CATTCTTTTA AAGATGATCC TTCTGCAAGG
CCGGCAGATT TTCCTTTACA GGACTGGAAC CGGTTTATGT CCATGGCACA ATATCCTTAT
TATCGTTCTT ATGCAGAGAT ACTTCATATC AACAAGAAGG ATACGATAGC TTTGGATTAT
ATAGAGAAGG CTTTTAGTTA CCTCCCGCTG GACAAAACGG ATCAATCCTC TGCGGAGTTA
TACGCAGCAC TTTTGGAAGC AAATCATCGG GAAGACGATG CCTACGATAT CCTACTTAAT
AGCGCATCAA CGGGCAATGC CAGTCTGCAG ATGCAACAAC AACTCAGAAG ACTGTTAATT
AAAAGAACGG GTAACGCAGT ACAGGTAACC CATTTCCTGG ACTCTCTTCA ACGCAATATA
GTACAGGCAT ACAAGCAGGA ACTGATGAAT AAAATGATCA AAGACATAGC TGCCCCCGGA
TTCACGCTTA CCAACACGGA AGGCGAGCGC ATCTCGCTTG CTGATATAAA GGGTAAGGTT
GTCGTACTTG ATTTCTGGGC TACCTGGTGC GCGCCCTGTA AAGCAGCTAT GCCAGCAATG
GAACAATTAA AACATACGCA TCCGGAGCTC TGTTTGCTCT ATGTAGCCAC CATGGAAAAA
GGAGCAGATG CGATCAGCAG GATAAACCAG TATCTTAAAA AACATATGCA TCCTACCAGT
ACATTGATCG ATGTCCCTGT GGCGGGTCAT CCGGATCGCT TTACAACAGC CGGTGCTTAT
CATGTGAAGA GCATCCCATG CAGGGCCGTC ATTGATAAAA AAGGAAAACT CCGGTTTTTG
TCTGAAGGAT ATACTTCGGA TACAGCGCTA ATCAATGAAA TGGAAGCCAT GATCGATATT
GCCAAAGAGC AATAA
 
Protein sequence
MKITSILFIT LQLLAGWQAN AQHKDALNAR FNTMTRETSP EKNVAAIAAL IKAFKLDTIK 
DAGDIDIMKG ITALTFLKVK DFPHFEVYIS QIKNPFNQTS YLNMAVNELI NNKTSLTYAE
LTAKKTVDLY HSFKDDPSAR PADFPLQDWN RFMSMAQYPY YRSYAEILHI NKKDTIALDY
IEKAFSYLPL DKTDQSSAEL YAALLEANHR EDDAYDILLN SASTGNASLQ MQQQLRRLLI
KRTGNAVQVT HFLDSLQRNI VQAYKQELMN KMIKDIAAPG FTLTNTEGER ISLADIKGKV
VVLDFWATWC APCKAAMPAM EQLKHTHPEL CLLYVATMEK GADAISRINQ YLKKHMHPTS
TLIDVPVAGH PDRFTTAGAY HVKSIPCRAV IDKKGKLRFL SEGYTSDTAL INEMEAMIDI
AKEQ