Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2655 |
Symbol | |
ID | 8358815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3243292 |
End bp | 3244206 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964837 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003122338 |
Protein GI | 256421685 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.5275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAGA AAAAAGCGCC GCCTGTATTT AACTCCGTAT CTGAATTACT CAGAGCATTG GGACTACCTG CTCCGCAACA CCCATTACTC ACCGTCACCA ACTACGCGGA GATTACTGCT GATGTGACCG AACTCTCCAA AGGGATGGTC CTGAATATGT ATAAGATCTC CCTTAAATTT AACTTCAGGG GAAAGATTAA GTACGGACAA CAGTACTACG ACTTTGACGA AGGCGGACTG AGTTTTGCAT CTCCAATGCA GGTGATTGCC GCAGGGGAGG AAGAAGCGGA TTACAGCGGA CTGACCTTAC TCATCCATCC TGATTTCCTG CGTAATTATC CCCTGGCTAA AACAATCAAA GATTATGGCT TCTTTGATTA CTCCGTGAAT GAAGCACTCG GTCTTTCCGA ACAGGAAAAA GACGTCATCA TGGGCATCTT TGAAAGCATC AAACGGGAGC TACATGCAGC TATCGATCAC TTTAGTCAGG ATATTATTAT CTCACAAATA GAACAGCTAC TCAATTACAG TAACCGTTTC TACAACCGTC AGTTTATCAC CCGGAAAGCC GTGCACAACG ATCAGCTCTC CACTTTAGAT GATATGTTGC GCAACTATTT CGATCGCAAT AATGCCTTGT TTGAAGGTAT CCCCGCTGTA GAGGAAATAG CGGCTAAACT CAACGTGTCC CAACGTTATC TCAGTGATAT GTTACGCACA CTGGTAGGCG TAAATACACA GCAATACATC CAGCTGAAAA TGATCCACAA GGCAAGGGAG TTATTGAGTA CAACAGATCT TACTATCGCA GAAATAGCCT ATCAGCTGGG ATTTGAATAT CCGCAGTCCT TCAATAAATT CTTTAAGAAA CAAACGACGC TCTCTCCGCT GGACTTCAGG AAATCATTCA ACTAG
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Protein sequence | MGQKKAPPVF NSVSELLRAL GLPAPQHPLL TVTNYAEITA DVTELSKGMV LNMYKISLKF NFRGKIKYGQ QYYDFDEGGL SFASPMQVIA AGEEEADYSG LTLLIHPDFL RNYPLAKTIK DYGFFDYSVN EALGLSEQEK DVIMGIFESI KRELHAAIDH FSQDIIISQI EQLLNYSNRF YNRQFITRKA VHNDQLSTLD DMLRNYFDRN NALFEGIPAV EEIAAKLNVS QRYLSDMLRT LVGVNTQQYI QLKMIHKARE LLSTTDLTIA EIAYQLGFEY PQSFNKFFKK QTTLSPLDFR KSFN
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