| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2644 |
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| Symbol | |
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| ID | 8358804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3234899 |
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| End bp | 3236353 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644964826 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003122327 |
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| Protein GI | 256421674 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.94873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACGA TGCTTCGTCA GACTATTACT TACAAAACAA CTTCCTATCC GTCGATCTAC
CGTTGGGTAG CATTGTTAAT CGTCTCAACA GCGGCTTTTC TTTCCGTGGT GGATCTATTT
ATCGTGAATG TGGCTTTACC CTCTATACGG GAAGGTATTC ATGGTACAAA CGGCGACAGC
CAGATGGTCA TTGCCCTGTA TCTGCTGGGA CATGCGATAT TTCTGATCAC CGGAGGACGG
TTCGGGGATT ACTATGGTCA TAAAAAGGTG TTTATCTGGT CCATGCTGCT ATTTACAGTC
GCTTCTGTAT GTTGTGCCGC TGCACAAAAT GCCACGCAAC TGAATATTGC ACGGCTGCTG
CAAGGCACAT TTGCCGCGTT TATGGTACCA CAGAGTATTG CCTACATTCA ATTCCTCTTT
CCGGAACATC ATGAGCGGGC AAAGGCTTTG GGTATTTATG GCGCTATTGC CGGCATTGCG
TCTGTATTGG GTCAGTACCT GGGTGGCTTA TTACCGGAAA TACAAAGTGC CATCAGCGGC
TGGCGATGGC TGTTCCTCGT CAATCTGCCT GCAGGGCTAT TATCTGCTGC CGCTGCGGCG
TACTGGCTGA AGGCGCCTGC TACCAAAATC AACGGCCGAC CAGACTACAG CGGTGTGCTG
AAGCTAAGCC TGGGACTGAT CGCACTGATC TATCCATTGA TCCGGGGAAG GGAATTGGGC
TGGCCCTTGT GGAGTGTGCT TTTATTGCCA CTTTCCTTTG TATTACTGGC CTGGTTTATC
AGGGACCAGT ATTACAAGCA AAAGAAAGGA AAGCAGTCCC TGATTGATCT GCAATTATTC
CATAACCGCA GTTTTAATAC CGGCCTGATG ACGGCAACCG CCTATTTCAT TGCGCAGGAT
TCTTATTTCC TGATTAATAC GGTATTACTG CAGACCGGCA TCGGCTTATC ACCTTCCTCC
ACCGGCAACT ATTTCGTCAT ACAGGGCGTA GGATATGTGG TGGCAGCTAT CTTTTCTATC
CGCCTGACAG TCCGGTATGG AAAAGCTGTC TTGCAGGCGG GTGTACTGCT GATGTTGACC
ATGTTGCTCG TGCATATACT GATCATGGAA ACGGCGCCTG CAGATGCGCT GTTATCGGCC
ACGGCCTACC GGCAGGTATT CCTGGCGGTG CTGTTTTTAT ATGGAATGGG CTGCGGATCG
GTATTGCCTT CCCTCCTTAC CATTACATTA AAGAAAATCC CCACACATCT GGCATCTACT
GCGGCGGGTG CGTATGTGAC TTTTCAACAG ATCTCTATTG CGTTGGGGGT GTGTATTACC
GGCGGACTTT TTTTTCAGTT CCTGGGAGCG CATCCTTCGT TGGCGCAATG GCTGACGGCT
TATCGCTGGG CGACGGGCGC TAATATGTTC TTTTTACTGG TAGTGGCCGC GGCTTTGTCC
GTTAAAAAGG ATTGA
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| Protein sequence | MRTMLRQTIT YKTTSYPSIY RWVALLIVST AAFLSVVDLF IVNVALPSIR EGIHGTNGDS
QMVIALYLLG HAIFLITGGR FGDYYGHKKV FIWSMLLFTV ASVCCAAAQN ATQLNIARLL
QGTFAAFMVP QSIAYIQFLF PEHHERAKAL GIYGAIAGIA SVLGQYLGGL LPEIQSAISG
WRWLFLVNLP AGLLSAAAAA YWLKAPATKI NGRPDYSGVL KLSLGLIALI YPLIRGRELG
WPLWSVLLLP LSFVLLAWFI RDQYYKQKKG KQSLIDLQLF HNRSFNTGLM TATAYFIAQD
SYFLINTVLL QTGIGLSPSS TGNYFVIQGV GYVVAAIFSI RLTVRYGKAV LQAGVLLMLT
MLLVHILIME TAPADALLSA TAYRQVFLAV LFLYGMGCGS VLPSLLTITL KKIPTHLAST
AAGAYVTFQQ ISIALGVCIT GGLFFQFLGA HPSLAQWLTA YRWATGANMF FLLVVAAALS
VKKD
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