| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2605 |
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| Symbol | |
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| ID | 8358765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3191978 |
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| End bp | 3194251 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964788 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003122289 |
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| Protein GI | 256421636 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0289193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT CTGCAAAAAC CCTTCTGTTG TCCGCCCTGT GTACGGCTTT TGCGGCTGAC
AGCTATAGCC AGTCTTCCTG GCAGATGCAG CCAGTGCCCA TCCAGACCCG TTGGGCAAAA
GACGTCAATC CTGATCACGT ATTACCTGAA TATCCACGTC CACAACTGGT CCGTCCTAAA
TGGACCAATC TGAATGGCCT CTGGCAATAT GCCATTACAG CAAAGGAAGC CGCCATTCCT
ACTTCTTTTG ATGGTCAGAT ACTCGTCCCC TTCCCGGTTG AATCCGCCTT ATCAGGTGTA
AAAAAGCCCG TATTGCCAAC GCAACGTGTG TGGTATAAAC GTAGCTTCTC CAAACCGGAC
CTGCAGGCAG AAGAAAAAGT ATTGCTGCAC TTCGGGGCAG TGGACTGGCA AAGCAAAGTC
TATGTCAACG GGAAGGAAGC TGGACAACAT AGCGGAGGAT ACCAGGCATT CTCTTTTGAT
ATTACCTCGC TGTTGAAAGA GGGAGAAAAT GAACTACTCG TAGACGTTTA TGATCCGACG
GATCAGGGAC CTAATCCCCA TGGTAAACAG GTACTGGCGC CCAAAGGCAT CCGGTATACT
GCAACGACGG GCATCTGGCA GACGGTATGG CTGGAAACTC TGCCAGCTGT CTATATCACC
GATCTGGTTA TCACACCTGA TGTTGACGGA GGCTATCTGT CTATTAAGGT GCATACATCC
GGCGACACAA AATTTACAGT GGAAGCCGAA GCCAGTGCAG ATGGCAAAAT GAGCGGTTCT
GTAAAAGGAG CCGTCAATCA GTTATTGAAG CTGCCATTAC GGAATGCGCA TCTCTGGAGT
CCGGAAGATC CTTTCTTATA TGACCTTAGC ATCCGGCTCA TAAAGAATGG CGTTGTAAAA
GATAAGGTCA CTTCGTATGC CGGTATGCGG AAGATTGAGA TCAAGAAAGA CAGTAAGGGA
CAGGAACGTA TTTTCCTCAA TAATACATAC ACCTATCATC TCGGGGTACT GGACCAGGGT
TTCTGGCCGG ATGGTATCTA TACAGCGCCC ACAGACGAGG CTTTACGTTT TGATATAGCG
GCTATCAAAA GCATGGGGTT CAATACCATC CGTAAACACA TCAAAATAGA ACCTGCCCGC
TGGTATTATC ATGCTGATAA ACTGGGTATG CTGGTATGGC AGGACATGGT CACCTGCGCC
AGTCTGGATG CGGACGCAAA AGCCGCATTT GAGGCAGATA ATGCAGCAAA CGTGCAACAG
TTATACAATC ATCCCTCTAT TATCTGCTGG GTACTGTTTA ATGAAGGTTG GTACAGTTAT
GACCAGCCCC GGCTTACACA ATGGTTTCAT CAGAAAGATC CTACACGGCT TATCAATGGG
CATACCGGAG AGAATTATGA CAAGGAAGGC GCTACGACTG TTGTCAATAA ATGGCCAGGC
AGTGACCTGG CAGATATACA TGATTATCCG GGGCCGGGTA TTGCACCTGC CGTACCAGGA
AAAGCGCGTG TACTGGGAGA ATGGGGCGGT GTAGGCGTAC CTGTAAAAGG TCATCAATGG
AACGCAGCGG CAGGATGGGG ATATGTGAAG ATCACACCAT CAGAAATGAC GGAAAAATAT
TCTTCTATGG TAAAGAAGCT GAAGCAATAT GAAACAGATG GACAATCCGG CTCTATTTAT
ACGGAACCTT TTGACGTGGA GATAGAAGAA AACGGAATGA TCACCTATGA CCGCGCAGTG
GTGAAAGTAC CTATGGAAGT ACTAAGACAG TTACATGCTC CTTTTGTTCC ACAGGAACGT
AGTAAACCGC TGTTACCTAT GCTTGCCTTA AAAAATGCGG ATACCAGTTC CATTCCTGAT
CCCCATCGCC GGCAATTCCT CGCCTTACTG GAACTGGAGG CAGATGTAAA GAAAACACGT
AACTACAAAG CACTAACGGA TACTTTAACA GATTATCTCC AACATGGCGG CAGCAGCTTC
TCTCCTGCCA AAATTGCCAG CATCTCAAAG AAAGTGTTTG AAGGTACCAG TGATGTCGGT
TTATTAAATC AGGCTTTAAA ATGGATGGAG AAAGCAGTGG ATATGGAAAG GAATTCATTT
ACCATGAGCA CTTATGCCAA TCTGTTATAT CGGCTCGGTA ATAAAGCCGA AGCGCTGAAA
TGGATGGATA AGGCAGTGGT ACTGGCGCCG GAAAATGAGC AGCCGGATTA TAAGGTAGTG
ATGGATAAAA TGCAGAGAGG GGAAAATACG TGGCCTGCAA GCAATATTAA TTAA
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| Protein sequence | MKRSAKTLLL SALCTAFAAD SYSQSSWQMQ PVPIQTRWAK DVNPDHVLPE YPRPQLVRPK
WTNLNGLWQY AITAKEAAIP TSFDGQILVP FPVESALSGV KKPVLPTQRV WYKRSFSKPD
LQAEEKVLLH FGAVDWQSKV YVNGKEAGQH SGGYQAFSFD ITSLLKEGEN ELLVDVYDPT
DQGPNPHGKQ VLAPKGIRYT ATTGIWQTVW LETLPAVYIT DLVITPDVDG GYLSIKVHTS
GDTKFTVEAE ASADGKMSGS VKGAVNQLLK LPLRNAHLWS PEDPFLYDLS IRLIKNGVVK
DKVTSYAGMR KIEIKKDSKG QERIFLNNTY TYHLGVLDQG FWPDGIYTAP TDEALRFDIA
AIKSMGFNTI RKHIKIEPAR WYYHADKLGM LVWQDMVTCA SLDADAKAAF EADNAANVQQ
LYNHPSIICW VLFNEGWYSY DQPRLTQWFH QKDPTRLING HTGENYDKEG ATTVVNKWPG
SDLADIHDYP GPGIAPAVPG KARVLGEWGG VGVPVKGHQW NAAAGWGYVK ITPSEMTEKY
SSMVKKLKQY ETDGQSGSIY TEPFDVEIEE NGMITYDRAV VKVPMEVLRQ LHAPFVPQER
SKPLLPMLAL KNADTSSIPD PHRRQFLALL ELEADVKKTR NYKALTDTLT DYLQHGGSSF
SPAKIASISK KVFEGTSDVG LLNQALKWME KAVDMERNSF TMSTYANLLY RLGNKAEALK
WMDKAVVLAP ENEQPDYKVV MDKMQRGENT WPASNIN
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