Gene Cpin_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2587 
Symbol 
ID8358747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3169815 
End bp3171773 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content49% 
IMG OID644964770 
Producthypothetical protein 
Protein accessionYP_003122271 
Protein GI256421618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0216608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTG TTCTAATTGT TGCCTCCATG CTGGTCATAT GTGCCTGCCG GCTATATGCA 
CAAACCTATA CGCCTATAGC TGTAACGGGT TACAACAATG ATGGTGTTGC AGAAGCAGGC
ATAAACGCTA CCGCCGTGAC CAGTACAGGT CTGGATATCC AGGAAAAGAT CCTGTATACT
TTTGATTTTG CCGCGCTTAA TAACCTGGAT GCGGGTATAC CCAATGACGG TCTCTTCTCC
ACAGGCTTAC GTACCTACCA GATGGCCGCT TACACCGGTA ATAACGTATT GTACATGTCT
AAAAACGGAA ACGTTAACCT GACGACCGGT TTAGACACCC TGACATTTGT TACACCCGGC
GCTTACAGTA AGATCAGTTT TCTCTGTTAT TCTACAGAGC AAAGCAGTAC AGTGTCTATT
ACGTTTAATT ATACAGACGG TACGCATTCC GTTCCTGATA CATCCACGAT CCTCGACTGG
TTTGGTGGTA CCAATCCTGT TTTTGACAGC TATGGCCGTA TCAAAAGACA GGCGGCTGGT
CCTTACAGTG TGGAAGGTCT CAGCTCGAAT GACCCGCGTA TTTATTGTAT CGATATAGCT
CCTGCCTGTG CAAACCAGGC AAAGGACATT GCATCTGTTT CCATTAATTA TGTGCAGAGC
GGCGATCCCG GTAATACGTC AAGAGCCGTG TTCCTGGCAG TATCCGGACA GGCATATGTA
CCGATTGCTG TGACGACTGA TGTAACCAAA GCCACCTGTG GCAATAGTGA TGGTGTTGTG
CAGGCAACAG CCAGCGGCGG TTCTTTCCCG CTGAGCTATT CCTGGAATAC CACGCCGGTA
CAGACAACAG AAACCGCTAC CGGTGTAGCA GCGGGTACCT ATACCCTGAC AGTGACCGAT
GCGAATGGTT GTCCGGCGGA TTTCACCGCA GACGTAAGTG AAGAATCCAT GATCCTCCTG
AAGGCATTGG CTAAACCAGG TGATATCTGC ACGGGTACTG ACACGAAGAT CTGGGCGATT
CCAACAGGCG GACGGATGCA GTCCTATACA TGGGAACCAG GGGCCAGGAC AGACTCCAGT
TTCACCATTT CACCAGATAC CACGACGACT TTCAAACTGA CGGGTGTTGA TGAAAATGGA
TGTAAAGTGA TAGACAGCAT CAAGATAACC GTCACCCAAA AACCGGCTGC GCCGTTGGTA
ACACCGGTGA CGCTTTGTCC GGATAGTACG GCCACATTAA ATATCACCAA TGCCAGCACA
CCATTTACTT ACAACTGGTA CACCTTCCCT TCAGGAGGCA GCGTACAAGG CACCGGCGCA
ACATATGAGA CGCCGGCTAT CACGACAGAA ACAACTTTGT ATGTGGAAGC GGTGAATGGC
CCATGTGCCA GTGACAGAAC AGCGGTGACA GTCACTCCGT TTGACAGGGC TCCTACACCC
GTAGTAAAAG CAGGTACGAT CACTGCCACT GGCGTGACCT TTACCTGGGA TCCTGTACCA
GGTGCTACAG GTTACCTGGT ATCTGTGGAT GGCGGCGCTT ATAATGCTCC TAGCAGCGGT
AATATGGGTA CCACTCACCT GGTGAGCGGC ATCACCAATC AGCAGTCTAT CAACATTAAA
GTAATTGCCC TGGGGCCGCT GGCTTGTCAG AATAGTTTGC CGGGACTGGC CAGTGCAAAA
CCTAAACCAG GCGAGATCTT TATTCCAAAT GCCTTTACGC CGAACGGTGA TGGTAAGAAT
GACTATTTCA AACCGGAGGG TACGTCTATC TCTGCCATTG AGATGAAAGT ATTTAATCAG
TGGGGAGAGC TGATCTATCA GACGAACCAG CTGACCGGAT GGAATGGCAC TTATAATGGT
AAACTACAGC CGTCAGGCGT ATATAGTTAC ACTGTAAGGA TTACTATGAC AGATAAGACC
AGTGTGGTTA AAAAAGGAGC CATCAATTTG TTACGATAA
 
Protein sequence
MKRVLIVASM LVICACRLYA QTYTPIAVTG YNNDGVAEAG INATAVTSTG LDIQEKILYT 
FDFAALNNLD AGIPNDGLFS TGLRTYQMAA YTGNNVLYMS KNGNVNLTTG LDTLTFVTPG
AYSKISFLCY STEQSSTVSI TFNYTDGTHS VPDTSTILDW FGGTNPVFDS YGRIKRQAAG
PYSVEGLSSN DPRIYCIDIA PACANQAKDI ASVSINYVQS GDPGNTSRAV FLAVSGQAYV
PIAVTTDVTK ATCGNSDGVV QATASGGSFP LSYSWNTTPV QTTETATGVA AGTYTLTVTD
ANGCPADFTA DVSEESMILL KALAKPGDIC TGTDTKIWAI PTGGRMQSYT WEPGARTDSS
FTISPDTTTT FKLTGVDENG CKVIDSIKIT VTQKPAAPLV TPVTLCPDST ATLNITNAST
PFTYNWYTFP SGGSVQGTGA TYETPAITTE TTLYVEAVNG PCASDRTAVT VTPFDRAPTP
VVKAGTITAT GVTFTWDPVP GATGYLVSVD GGAYNAPSSG NMGTTHLVSG ITNQQSINIK
VIALGPLACQ NSLPGLASAK PKPGEIFIPN AFTPNGDGKN DYFKPEGTSI SAIEMKVFNQ
WGELIYQTNQ LTGWNGTYNG KLQPSGVYSY TVRITMTDKT SVVKKGAINL LR