| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2575 |
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| Symbol | |
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| ID | 8358735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3150198 |
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| End bp | 3152012 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964758 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003122259 |
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| Protein GI | 256421606 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.260702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.580332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAGTA AAGTAAAGGA CACAAACTGG TGGAAAGAGT CGATCATCTA TCAGATATAT
CCATGGAGTT TTAAAGACAG TAATGGTGAC GGCATCGGAG ATCTGCAGGG TATCATATCC
AAACTCGACT ATATTCAGCG TCTGGGTATC GATATGGTAT GGTTAAATCC CGTTTACAAA
TCTCCGAATG ATGATAATGG ATATGATATC AGTGACTATT ATGATATCAT GAAAGAGGTG
GGTACAATGG CAGATTTTGA CGCTTTGCTT AAAGGGCTGC ACGACAGAAA CATCCGTCTG
ATGATGGATA TCGTTGTCAA CCATACCAGT GACGAACATC CCTGGTTTCA GGAAGCAAAA
CAGTCCCGGC AAAGCCCTTA CTATAACTAT TACCATTGGT GGCCGGCCGA AAAAGGCAAA
CCGCCCCGCC GCTATAGTCA CTTCGACGCT ACAGGCAGCG CATGGACATA TAATAAAGCA
ACGGATTCTT ACTATCTGCA TTACTTCTCC GAAAAAATGC CCGACCTCAA TTGGGAAAAT
CCGCAAACGC GTAAAGACAT TTATGCCATT ATGAACTTCT GGTTTGATAA AGGCGTGGAC
GGCTTTAGAA TGGATGCCAT CTGTTATATC TCCAAAGATA CCAGCTGGCC GGATGTGGAA
AAATTAGTAG CAGAAAAATA CCAGCATGAC TGGGCTGGTT ATTACGCGCA CGGTCCGCAC
TTACATGAAT ACTTACAGGA ATTACACCGT GAAACGCTTA ACCGGCCAGA TGTCACTACA
TTGGCGGAAG CTTCCGGTAT TACAAGAGAA GAAGCGCTGG ATTTCGTGAA GGAAGACCGG
AAAGAACTGC ACATGCTATA TCATTTCGAA GGCGTACAAC TGGGATTCAC AAAAGAAGGA
TATAAACGTC TCGATCCCAA GGGTATTGAT CTCCGCCAGC TGAAACAGTT ATACACTGAC
TGGGACAGGA TATTTGAACT GGATGGCTGG GGCACTATTT ACCTTGGTAA TCACGATCAG
CCGCGTATGG TAACCCGTTG GGGGAATGAC GATGAGCAAT TCCGCGAAAT CTCTTCCAAG
ATGCTGATCA CCTTTTTGCT TACCATGAGA GCGACGCCGA TTTTCTATTA TGGCGATGAA
CTCGGTATGA CAAATATCCG TTTTGAGAAG ATAGAAGACT ACCGCGACAT CGAGACCATC
AACATGTATA AATACATTCA AAGCCAGGGC GGTGATTTAC CGCATTTTCT GAAAGATGCA
GCTCTCACTG GCAGAGATAA TGGTCGTACG CCCTTTCAAT GGGATGAATC GCCTAATGCG
GGTTTTACAA CCGGTAAACC CTGGCTGAAA ATCAATGAAA ATTACAAGTT GATCAACGCC
GCGCAACAGG ATAGGGATGA ACGCTCTGTT TTACAATACT TCAAGCAACT GGTACTGTTG
CGTAAACATA AACCAGTACT GATCCATGGC AAATATGAAT TGCTGGATGC CGATCATCCA
CAGGTGTACA CCTACACCCG TACACTGGAC CAGGAGAAAA TGCTGATCGT TCTCAACTTT
TCAAAAGAAG AGGTGTTGTA TACATTGCCG TTTGTACTCG ACATCGGTAC TGAACCACTC
GTGAATAATA TGCTCTCCTT CAAACTGGAG AATGATACCG TAACACTTGC TCCTTATCAG
GCATTGGTCT TCGGACCACT GCCAACAGAC TTGCCGCCCT TGCAGGACGA GGAACAGGCT
TTTGCTGAAG ACCTGCCGCT TGAGAAAATA AAAGAAGAAA ACTCAAGCCT CGAATCCAAT
GAGCTTGCTA TTTGA
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| Protein sequence | MSSKVKDTNW WKESIIYQIY PWSFKDSNGD GIGDLQGIIS KLDYIQRLGI DMVWLNPVYK
SPNDDNGYDI SDYYDIMKEV GTMADFDALL KGLHDRNIRL MMDIVVNHTS DEHPWFQEAK
QSRQSPYYNY YHWWPAEKGK PPRRYSHFDA TGSAWTYNKA TDSYYLHYFS EKMPDLNWEN
PQTRKDIYAI MNFWFDKGVD GFRMDAICYI SKDTSWPDVE KLVAEKYQHD WAGYYAHGPH
LHEYLQELHR ETLNRPDVTT LAEASGITRE EALDFVKEDR KELHMLYHFE GVQLGFTKEG
YKRLDPKGID LRQLKQLYTD WDRIFELDGW GTIYLGNHDQ PRMVTRWGND DEQFREISSK
MLITFLLTMR ATPIFYYGDE LGMTNIRFEK IEDYRDIETI NMYKYIQSQG GDLPHFLKDA
ALTGRDNGRT PFQWDESPNA GFTTGKPWLK INENYKLINA AQQDRDERSV LQYFKQLVLL
RKHKPVLIHG KYELLDADHP QVYTYTRTLD QEKMLIVLNF SKEEVLYTLP FVLDIGTEPL
VNNMLSFKLE NDTVTLAPYQ ALVFGPLPTD LPPLQDEEQA FAEDLPLEKI KEENSSLESN
ELAI
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