Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2572 |
Symbol | |
ID | 8358731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3143869 |
End bp | 3145488 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964754 |
Product | resolvase domain protein |
Protein accession | YP_003122256 |
Protein GI | 256421603 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACTC AAAGAAAAGC ATTTCTATAT CCAAGGGTAA GTACAGACGA ACAGGTTGAC GGCTATAGTT TAGCCCATCA GGAAGACGTA TTAATACGTT ACTGTGAGAA GGAGAACATA CAGGTAGTTG GCATTTATAG AGAAGATCAT TCCGCAAAGA CATTTGACCG ACCAGAGTTC CAAAAGATGC TACATGTCAT CAGTAAGAAC AAGGGTATTG TTGATCTAAT ACTATTCTCT AAATGGGATC GTTTCTCCCG AAATGTTGCT GCTGCCTATG AAATGATTGG CAAGCTGAAA AGGCTTTCCG TAGAACCTCA GTCCATCGAA CAGCCTTTGG ACATGGATAT ACCAGAGAGC AAGATCATGC TGGCAATCTA TCTTACTACA CCAGAGGTGG AAAATGACCG GCGGGCGTTA AACACGCTTC ATGGTATGCG GAGAGCTAAG AAAGAGGGGA GATACCTAGG TATTGCCCCT ATAGGTTACA AGAACGGGCG TGATGCTCAG AATAAGCCAT TTCTAATCCC CAATGAAAAA GCTGAGATAG TCCGTTGGGC ATTCGAAGAG CTATCCAGAA GCATCTGGGA TATTGATACA CTCAGACGTA TGGCAAACAG AAAGGGACTA AAAATAGGCC GTAGCCAGTT TTGGAGCCTT GTCCGTAACC CGGTCTATTG CGGGAAGGTT TTCATAGCTG CTTATAAGAA CGAATCAGCC CATTGCGTAA AAGGTATCCA TGAGCCTATC ATCTCCGAAA GTCTGTTCGA CGATGTTCAG GATGTCTTAA AAGGGAAGAA GCGGAATGTC AGGGTCAACA CTTTCACAGA AATTGACCAG CAACTTCCTC TAAGAGGTTT CCTGATCTGC CCTCGCTGTG GAAGATTATT AAGTGGGAGC GGATCAAAAG GCAATGGCGG TGTCTATTAC TACTATCATT GCCAATCCGT AAAGCTTTGT AAAGAGCGTT TCCGGGCAGA TACAGCGAAT GAGGCCTTTG TATGGCAATT AGGTCAGATA GCAGTCAATG CACCTATCAT AGACTATTAC TGCCAGATCA TTAGTCAGTC ATTAAAGAAG GATAACCAAG GCAAGGAGCA GGAGCTAAAA GAAACACAGG CCGAAATAGA CAAGCTATAT ATAAGAATAC AAAACGCCCG TTCTTTACGC CTGGACGATG AATTTACCGC AGAAGAGTTT AAAGAGATTA AGTCAGACCT GACCAGGAAG ATAGAAGAAC TGGAAAAGAA GAAAACGAAG CTATTATCCA CCAACGACAA CTACCAGGAA TACCTTTCCC AAGGTGGCGA AATCATGAAA AACATTGCTA CTCGCTATAT TTCCGCTTCC CCAATAGTCA AAAAACAAAT CATTGGTTCG ATCTTCGCAG AAAAGCTGAT TTTTTCAGAA AACAAATTTC GAACCACAGA ACCAAACGTC ATCCTCGAGC TGATAAGCAG GCCCAGAGCG GGCTCAGACG ACTATAAAAA GCAAAAGGTC GGAGAATACT CCGACCTTTC CGCTTTAGTG CCCAGAACTG GATTCGAACC AGCACACCCT TGCGAGCGCT GCGACCTGAA CACAGTGCGT CTACCAATTT CGCCATCTGG GCATCTTTGA
|
Protein sequence | MITQRKAFLY PRVSTDEQVD GYSLAHQEDV LIRYCEKENI QVVGIYREDH SAKTFDRPEF QKMLHVISKN KGIVDLILFS KWDRFSRNVA AAYEMIGKLK RLSVEPQSIE QPLDMDIPES KIMLAIYLTT PEVENDRRAL NTLHGMRRAK KEGRYLGIAP IGYKNGRDAQ NKPFLIPNEK AEIVRWAFEE LSRSIWDIDT LRRMANRKGL KIGRSQFWSL VRNPVYCGKV FIAAYKNESA HCVKGIHEPI ISESLFDDVQ DVLKGKKRNV RVNTFTEIDQ QLPLRGFLIC PRCGRLLSGS GSKGNGGVYY YYHCQSVKLC KERFRADTAN EAFVWQLGQI AVNAPIIDYY CQIISQSLKK DNQGKEQELK ETQAEIDKLY IRIQNARSLR LDDEFTAEEF KEIKSDLTRK IEELEKKKTK LLSTNDNYQE YLSQGGEIMK NIATRYISAS PIVKKQIIGS IFAEKLIFSE NKFRTTEPNV ILELISRPRA GSDDYKKQKV GEYSDLSALV PRTGFEPAHP CERCDLNTVR LPISPSGHL
|
| |