| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2461 |
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| Symbol | |
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| ID | 8358619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3028604 |
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| End bp | 3030346 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644964647 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_003122150 |
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| Protein GI | 256421497 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.913597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTC AAAACAAACT GCAGGCTTAT GTGGGGTGGT GCGGGATATG TATGCTATTG
TTATTGTTTA TCCTGACTCC TTTGCAAAAT AGTGACGCAC TTCAAAACGG TGTTACTGTC
TCAAAAACCT TCTTTTTTTC GGAAGGTGTT ATCCTGTTAT TACTGATCGG GAGTGTGATA
TGGTTATGCA GAGATAAGCA TATACAGATC AGCTTATCGA GGATTGATGG CATTTTTACT
TTACTTGTTC TTTATATCGC TTTGCGTAGT GGCGGGAGAA TTACTCCCCG CTTAATTGAG
TTGATAGCCT TAACAGGTTT TTACCTGGTG CTTCGCAGAT GTAAGTGGCG GCATTTCCTG
TTTATACTTT ATGCGATCGC TGTGGCTGGT ATTATTCAGT CAGTATACGG GCTATTGCAA
TTGTATAACA TATTACCCGC TCACAGCCAG TTCCGGTTGA CGGGTACGTT CTTCAATCTG
GGCGCCTATG CAGCTTTTGT CGCGTTAAGC GCATGTGTAT CCCTGGTGCT GATCTTTTAT
TTTAAAGATA AGCGCATGAG TATGATTCCG CAGCTCAATA TCGTGTTAGC GATTATCATA
CTGCCCATTA CCCAGAATCG TGCGGCATGG ATTGCATTGA TTGTAGTAGG TGTTTTTTTA
TATGCACGAT TTATGAAGAA GTATCTGCTG TACGGTATGT TAATAATTAC AGGTGTGTTG
GTGATAGCCG GAGGATATTA TCTGAAAAAG GATTCAGCTG ATGGGAGGGT ATTAATCTGG
AAAGTGACCA GTCAGATAGT TGGCGCGCAT CCGCTTACGG GTATCGGGTA TGATCGTTTT
GCAGGCGAGT ATATGAACTA CCAGGCGTCA TATATGCAGG CACAGGGTAG TCCGGGGGAA
AAACAGCTGG CTGATAATGT ATACTATGCA TTTAATGACC TGTTACAGTT GACGGCTGAA
TCAGGCGTAA TAGGGGCATT CGGTATCCTG TTACTAATAC TGGTTTGCTT CCGTGTGAAA
GGTTATGACA GGTTCCGTTA TGCCGGTCAG GCGATTATCC TGGGGTATAT GCTTATTGGG
ATGTTTTACT ACCCGCATTT CATACTGCCT TTAAAAATGA CAGGTGTATT GGGATTGGCG
ATGTTGTCAA GGATGGATAT AGCGGTGACA AGACAATTGG ATATTGTTCG GATGCCTAAG
ATCCTGGTGG TGACGATCAC GCTTATCCTG TCTGTTGCAG GTATCCTAAT CGCAGAGCAG
CTGAAAACGG GTTATAAACA ATGGGGAAAG GCACAGGTAG CCTATCAGCA TCAACGTTTG
GATGAAAGTA TCCGGTATTT TGATCAGGCA TTGTCTTATC TGCCACAGGA AGGAGAACTA
ATGTCAGCAG CCGGTAAAGC TTACTTCCTT GCTGATTCCC TGGAAAAGGC CGTACAGTAC
CTGACACAAA GCAAGGCTTT TCTTAATAAT ACGGTCATTG AAACGACCCT CGGCGATATC
AGTGTACAAC AGCACAATTA TGTTGCTGCA GAGAGATATT ACCAACAGGC ATTACACATG
GTGCCTAACC GGTTTTACAC AGAATATATG TTATTGAAGC TGTATGTTGC CAGTAATGAA
AGTGAGAAAG CCTGTACCCG GGCAAACCTT ATTCTGCATA AAGAAGTCAA AGTGTCTTCT
ACTGCGGTAC AGCAGATTCA GGATTCCGCC AGAGTGTATT ACGCCAATAA TAAATGCCAT
TAA
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| Protein sequence | MNTQNKLQAY VGWCGICMLL LLFILTPLQN SDALQNGVTV SKTFFFSEGV ILLLLIGSVI
WLCRDKHIQI SLSRIDGIFT LLVLYIALRS GGRITPRLIE LIALTGFYLV LRRCKWRHFL
FILYAIAVAG IIQSVYGLLQ LYNILPAHSQ FRLTGTFFNL GAYAAFVALS ACVSLVLIFY
FKDKRMSMIP QLNIVLAIII LPITQNRAAW IALIVVGVFL YARFMKKYLL YGMLIITGVL
VIAGGYYLKK DSADGRVLIW KVTSQIVGAH PLTGIGYDRF AGEYMNYQAS YMQAQGSPGE
KQLADNVYYA FNDLLQLTAE SGVIGAFGIL LLILVCFRVK GYDRFRYAGQ AIILGYMLIG
MFYYPHFILP LKMTGVLGLA MLSRMDIAVT RQLDIVRMPK ILVVTITLIL SVAGILIAEQ
LKTGYKQWGK AQVAYQHQRL DESIRYFDQA LSYLPQEGEL MSAAGKAYFL ADSLEKAVQY
LTQSKAFLNN TVIETTLGDI SVQQHNYVAA ERYYQQALHM VPNRFYTEYM LLKLYVASNE
SEKACTRANL ILHKEVKVSS TAVQQIQDSA RVYYANNKCH
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