| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2434 |
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| Symbol | |
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| ID | 8358589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2993013 |
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| End bp | 2994779 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964620 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122126 |
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| Protein GI | 256421473 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000109153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.490439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATC TGAAAACCAT GAAACTGTAT CAATCACTCT CTATAGTATT CTTTACAGGC
ATGAGCCTGG GTATATCCTC CTGTAGTAAA TTCCTGGACA GGGTGCCGCC TTCTTCATTG
AAAGAAGAAC TGGTAGCGAA TAAAAAAGGA ATCAATGCAT TACTGGTAGG CGCGTATGGT
GCACTCGACG GACAAGACTT CACAGATGGT GATATGACAA ATCTTTCAGG CGGTAGCGGT
TATGCCGTAT CTCCTGACAA CTGGATCTAT GGCAGCGTAT GTGGTGGCGA TGCACACAAA
GGCAGCGATC ACTTTGACTC TCCTCCTACG CTGGATCTGG CGCGTTTCAG TGCCGGTGCG
ACCAATAGTT TCCTCAATGA TAAATGGCGC GTAAATTATG AAGGTATCAC ACGTTGTAAT
ACCGTACTGA AGTTGTTACC GGAGGCTACT GATATGTCGG AAGACGAGAA AACTGAAATA
GCCGCTGAAG CACATTTCCT ACGCGGACAC TATTACAGCG ATCTGAAAAA GATGTTCAAC
ATGGTGCCAT GGATTGATGA AAGTACCACC GACATGAAGA CACCCAACAA TCAGGATATC
TGGCCAAAGA TCGAAGCCGA TTTTAAATCC GCGATGGATC ATCTCGCATT AACACAAGGC
GAAGTGGGAA GACCGAACAA ATGGGCCGCT GCTGCTTACC TGGCGAAGAC GTATATGTAT
GAACACAAGT ACAATGAAGC AAAGCCGCTG TTTGATCTGA TCACCACCAC AGGCGTAACA
TCAAAAGGCG ATCGTTATGC ATTGAGAAAC CGGTTTGAAG ATAACTTTGA TGCGGCTACA
GAAAACACTT CAGAATCTGT TTTTGCTATC CAATATGATG CGAATGATAA TTCAGGTACT
TCTGCGAATG CGAATCAGGG ACAGATGCTG AATTATCCGT ATAATGGTCC GTTTAGCTGC
TGCGGCTTCT TTCAGCCTAC ACAGGATCTC GTAAACTCTT ATATCACAGA TGCACAGGGT
TTACCTATCC TGGATGGTTA TAATACACAT AATGTCAACA CAGAAACAGT CGATCCAAGG
CTGGACTGGA CTGTCGGCCG TAAAGGCATT CCTTATCTCG ACTGGGGCAT ACATCCCGGT
GATACCTGGA TCAGGGAAGC TTCTACAGCA GGTCATTATT CTCCAAAGAA AAATGTCTAC
TGGCAGGCCA CGCAGGATGA ATACTACGAT CCACGTGGCT GGGCGCCAGG CAACGCCATT
AACTATAATG TAATACGATA TGCAGATGTA CTGCTGATGG CAGCAGAATG TGAAGCACAA
CTGGGGAATA CAGATGCAGC AGAACGTTAT GTGAATATCG TACGTACACG TGCTGCCCGT
CCGGAAAGCG CAGTATACAA GTATGAAGAT AACAGCGAAC CGATGGGAGG TTTTTCAGAT
CAACAGGCAG CGAATTATAA AGTATCTCCA TATCCTAACG GCACCTTCTC TTCCAAAGGA
AAAGATTATG CGCTAAAAGC GATCTATTTC GAACGTAAAC TGGAACTGGC AATGGAAGGT
CATCGTTTCT TTGACCTGGT GCGCTGGGGT ATTGCAGACC AGGCAATGAA TGCATTCTTT
GCTTTCGAAG GCGCCGCTAC ACTGGATATA CAAGGTGCCA GTTTTATAAA AGGAACGAAT
GAATATTTTG CGATTCCGCA ACGACAGATT GATCTTTCTA CAAACGGAGG TAAGATAACC
TTACAACAAA ACAACGGATA CCATTGA
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| Protein sequence | MLNLKTMKLY QSLSIVFFTG MSLGISSCSK FLDRVPPSSL KEELVANKKG INALLVGAYG
ALDGQDFTDG DMTNLSGGSG YAVSPDNWIY GSVCGGDAHK GSDHFDSPPT LDLARFSAGA
TNSFLNDKWR VNYEGITRCN TVLKLLPEAT DMSEDEKTEI AAEAHFLRGH YYSDLKKMFN
MVPWIDESTT DMKTPNNQDI WPKIEADFKS AMDHLALTQG EVGRPNKWAA AAYLAKTYMY
EHKYNEAKPL FDLITTTGVT SKGDRYALRN RFEDNFDAAT ENTSESVFAI QYDANDNSGT
SANANQGQML NYPYNGPFSC CGFFQPTQDL VNSYITDAQG LPILDGYNTH NVNTETVDPR
LDWTVGRKGI PYLDWGIHPG DTWIREASTA GHYSPKKNVY WQATQDEYYD PRGWAPGNAI
NYNVIRYADV LLMAAECEAQ LGNTDAAERY VNIVRTRAAR PESAVYKYED NSEPMGGFSD
QQAANYKVSP YPNGTFSSKG KDYALKAIYF ERKLELAMEG HRFFDLVRWG IADQAMNAFF
AFEGAATLDI QGASFIKGTN EYFAIPQRQI DLSTNGGKIT LQQNNGYH
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