Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2411 |
Symbol | |
ID | 8358566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2966542 |
End bp | 2968449 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964597 |
Product | AAA ATPase |
Protein accession | YP_003122103 |
Protein GI | 256421450 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | [TIGR00376] DNA helicase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000174617 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.335241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTATT TCAAAAAGCT GCTTGAATTA CTGAAGACAG AGCGGGAAGA AGACAGAAAA GCATACCTGG AAATGACAGC ATCTACGTCT GTAGCCGAGC GCAGGGCGAA TGGACTCAGC TGGTACCCTA TTGCCATCAG AGGTTCAGAA ATGAGCCGGG GCGATTATCT CACGGTAGAA GTAGAGCGCA CCACGCACCA GGATATCAAT CACCAGCTCC GTTTTGGCGT ATCAGCAGTA CTTTTTTCGA ATCATGATCC AAAAACCGAC CGGGTAGAAG GTACGATTTC CTACCAGGGA GGTAATAAGC TGAAGATCAC CCTGCGTACC GATGAACTGC CCGAATGGGC TAACAACGGC AAACTGGGTA TCGACCTCCT CTTTGACGAC AACAGCTATG ACGAGATGCA GAATGCACTC AAACAGGCTG ATACCCTTGC CGAAAAAGGA GAAAACGACC ATCTTATCAG GGTGCTGACG GGTGAAAAGT CACCCGGTTT TCACGACAAT CTCCCTCCTG TTATTATTCC CAGACTCAAT GCCTCTCAGC AACATGCGGT GAATCGTATA CTTGCTGCGA ATGATCTCGC GATTGTACAT GGCCCTCCGG GTACCGGAAA GACCACCACA CTGGTGCAGG CTATCAAAGC ACTGATCAAA CAGGATAATA AACAGATACT TGTCGTAGCG CCCAGTAACA CCGCTGTGGA CCTGCTGAGT GAAAAACTAT CTGAAGAAGG ACTTAATGTA CTCAGGGTAG GTAACCCTGC CCGTGTTTCT GAACGTTTAT CTTCCCTGAC ACTGGATAGC CGCATGACGG AACATGCCAG TATGAAGGAG ATCAAACGTC TGAAAAAACA GGCCAATGAG TTCAGGGACA TGGCCCACAA GTACAAACGC AACTTCGGTA AAGCAGAACG TGAACAGCGC AAAGCCCTGT TTGACGAAGC CCGTAATATC ATGAAATCGG TAGAGAACAC CGAACAGTAT ATCATGGACG ATCTGATGGC AAAAGCACAG ATCATTACGG CTACGCTGGT CGGCGCCAAT CACTATACCG TACGTAAACT GAAATACCAT ACCATCGTTA TCGATGAAGC AGGACAGGCA CTGGAACCGG CCTGCTGGAT ACCGATATTG AAAGCGCAGA AGGTGATACT GGCCGGCGAC CATTGTCAGC TGTCACCTAC TGTCAAGTCG GACGAAGCAG CCAGGAAAGG TTTAAGTACG ACCCTGCTGG AAAAATGTAT TGCCCTGCAT CCTGAGTCAG TGGTATTGCT GGAAGAACAA TACCGTATGC ATGAGATGAT CATGGGATAT TCGTCTGCTG TTTTCTATGC CGATAAACTG AAAGCACATG CTTCTGTGGC AGCGCATACA TTGTTCCCCG ATGATATGCC ATTGTCATTT GTAGATACGG CAGGTTGCGG CTTTGACGAA AAAACAGAAG GCACCAGTAC GACCAATCCG GAAGAAGCAG CCTTCCTGTT CAAACACCTG CGGCAATTTG TTACAGGACT ACACACACAT TATCAGCCGC AGCAATTCCC CAGCATTGCT ATCATATCCC CTTATAAACA ACAGATCCAT ATTCTGAAAG AACAACTGCT GTCTGTACCT GAATTGCAGG CTTACGGAGA CAGAATATCT GTAAATACGA TCGACAGCTT CCAGGGCCAG GAAAGAGATA TTGTCTACAT CAGCATGACC AGGAGCAATA ACGACAATAA AATCGGCTTC CTCTCTGACA TCAGACGTAT GAATGTGGCC ATGACAAGGG CCCGAAAGAA GCTGGTAATC ATAGGTGACA GCGCTACTTT GTCCCAATTG CCCTTCTATG CGGGGTTTAT CGCCTATGCA GAGCAGCAGA ACGCCTACCA GAGCGCATGG GAATTTATGG ACAACTAA
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Protein sequence | MDYFKKLLEL LKTEREEDRK AYLEMTASTS VAERRANGLS WYPIAIRGSE MSRGDYLTVE VERTTHQDIN HQLRFGVSAV LFSNHDPKTD RVEGTISYQG GNKLKITLRT DELPEWANNG KLGIDLLFDD NSYDEMQNAL KQADTLAEKG ENDHLIRVLT GEKSPGFHDN LPPVIIPRLN ASQQHAVNRI LAANDLAIVH GPPGTGKTTT LVQAIKALIK QDNKQILVVA PSNTAVDLLS EKLSEEGLNV LRVGNPARVS ERLSSLTLDS RMTEHASMKE IKRLKKQANE FRDMAHKYKR NFGKAEREQR KALFDEARNI MKSVENTEQY IMDDLMAKAQ IITATLVGAN HYTVRKLKYH TIVIDEAGQA LEPACWIPIL KAQKVILAGD HCQLSPTVKS DEAARKGLST TLLEKCIALH PESVVLLEEQ YRMHEMIMGY SSAVFYADKL KAHASVAAHT LFPDDMPLSF VDTAGCGFDE KTEGTSTTNP EEAAFLFKHL RQFVTGLHTH YQPQQFPSIA IISPYKQQIH ILKEQLLSVP ELQAYGDRIS VNTIDSFQGQ ERDIVYISMT RSNNDNKIGF LSDIRRMNVA MTRARKKLVI IGDSATLSQL PFYAGFIAYA EQQNAYQSAW EFMDN
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