Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2410 |
Symbol | |
ID | 8358565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2964890 |
End bp | 2966485 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964596 |
Product | hypothetical protein |
Protein accession | YP_003122102 |
Protein GI | 256421449 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000257866 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.6934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAA CTATCCTATC GTGTCTGCTT GCCTTATTAC AGGCAGTTGC ATTCGCGCAA TTTAAAACTG TAGCTGAAAC ACCCTTATTT AAGGAACCTG AGTCCGGATT TGCTAAACTC CTGCAACTAA AGAATGGAAA TACAGTGGTC GTCCATCTGA CCAACAGGAA TGGTATCAAT CTGACTTTTT ACGATCCCCA GCACAAACTT GCGGTCAACA AACATCATGA TCCTATTTTT CAAAGGCTGA GAGGTGCGCG CGTAAACGCC ATTTTCGAAG CAGACGGCGC TATCGTTATG CTGATCAGCG AAGTAGAGGA AAGAACCCCA CTGCTGTACA GACTCGTATT CGATGGTGTT ACCGGTAATC TGCAAAGAGA GGAGAAGATC GCGGAAGCCG AGAAGTTTCA GTTCATGGAC GTACGCTGGA TACCGGAATT TGACCCGGTG AACTCCTTTG CAGTGAGCAA GGACCCCGGT AGCGACAACT ACGCTGTATT CATCCGCAGA AACAGAAATG AATTTGCCGA TAAAAACCAG ATGGAAGTGG TGATGTACAA TGGTCAGCAC CAGGAAATCA GCAGGGCATT CTATCAGCCC CCGTACAAAT ACACGTCCCT GAACTACCTG GATATGGCGG TATTAGGTGA AGACCGTGTA TGTATCCTGG GCTTCGCTTA CAACCAGATT GCTGCCAGCG ACAGGGAAGG ACAACTGGTA CTGCTCTCCC TGACCAAAGG CGCCCGTAAA ATGACAGCAG AACTGCTGGA CTTACCTGAT AACCGTATTG CTGACAGTGC GATCGTCCGC TTCAACCCTG TCACTAAGAA ACTAATGCTG CTGGGCACCT CGCATATTGA AGATGCCAAC CCTCAGCCCT ATAGTGGATT CTTAGCGATT ATAGACCCTT TTAAGCCCAA AACAGAGCAA TTCCTGGACA TCTATCCAGC TGAGGCAGAC ACGCAGAAAA AGAAGCTCTT TGGCCCTAAA CAAAGCTATA CGGGTACACC ACAGGACCTG GTGTTGCATA CAGATGGCAG TTATTCGATC ATTTACGAAG AGCTGAACCC TGAAAAACAC GAACCGATCA ATGGACAGGC ATATACCTAC TATAACCTGG ACAATATGGC GATCAGCTCT TTTGATGCCG GTCACAAACT GACATCCAGC AGCTTTATTC CTAAAAAACA ATACCTGAAA AATACCGCTT ATACCAGCTT TTACCTGGCG CATCGCGGAC TGTCGGCACA ACAGTTCATC ATGGGAGATC AGTATCGTTC CTTCTCCTAT CTGAACATAA AAGACAGGAT GTATATACTC ATAAACGATG CAGAACAGAA TGCAGGTATC ACTACCGACG ATGTCGTACA ACTGAAGGTG CCTTCCAACG GCCAGGCTTA CATTTATACC GCCGGTACAA CAATGCCTGA ACGTGCACCG TTTTTCGGTA AACTGAAAAA GGGTGAAACA CACGCTTTAT CTGTGTTCAA TATTGCTGAT TATAACAGTG AACGTAATGT ATTTGTGACA TTGAAACTAG AGGTAACAGG CAAACAGAAA GGTGCAAAAC TCGTCTGGCT CGCACCGGAA GAATAA
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Protein sequence | MKATILSCLL ALLQAVAFAQ FKTVAETPLF KEPESGFAKL LQLKNGNTVV VHLTNRNGIN LTFYDPQHKL AVNKHHDPIF QRLRGARVNA IFEADGAIVM LISEVEERTP LLYRLVFDGV TGNLQREEKI AEAEKFQFMD VRWIPEFDPV NSFAVSKDPG SDNYAVFIRR NRNEFADKNQ MEVVMYNGQH QEISRAFYQP PYKYTSLNYL DMAVLGEDRV CILGFAYNQI AASDREGQLV LLSLTKGARK MTAELLDLPD NRIADSAIVR FNPVTKKLML LGTSHIEDAN PQPYSGFLAI IDPFKPKTEQ FLDIYPAEAD TQKKKLFGPK QSYTGTPQDL VLHTDGSYSI IYEELNPEKH EPINGQAYTY YNLDNMAISS FDAGHKLTSS SFIPKKQYLK NTAYTSFYLA HRGLSAQQFI MGDQYRSFSY LNIKDRMYIL INDAEQNAGI TTDDVVQLKV PSNGQAYIYT AGTTMPERAP FFGKLKKGET HALSVFNIAD YNSERNVFVT LKLEVTGKQK GAKLVWLAPE E
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