Gene Cpin_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2393 
Symbol 
ID8358548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2947092 
End bp2948396 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content51% 
IMG OID644964579 
Producthypothetical protein 
Protein accessionYP_003122085 
Protein GI256421432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.155273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0625599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA GCCATTCCCT ACCTGTACTG TTATTATGCC TTTCGGCATT TACCGCTCAT 
GCACAGGATC CATATTCCAG ACAACAATTA CAGGAACAAA CCGACGAATG GGATGAAGCC
AGCTGGTCCC CTCCTGATCA GGATTCCACC GGTTTACCGG GAGATAATTT TAGTCTGCAG
GGCGCGCTTA CGCTCTTTAA ACAGGCCAAC ACACCCGAAG AATTTGAACG ACTGCTCAAT
ACAGAATCCA ATAAAGTCAA TAACCTGGAC CTCAACGAAG ATGGCAGGAT CGATTATCTC
CGTGTCATCA ATAAAAGAAA AGACCAGGTA CAATTGTTTA TCATACAGGC ATTGGTGTCT
AACCAGGAAA GCCAGGATGT AGCTGTAATC GAACTGGAAA AAACCGGTGA GAATACCGCC
GTTATCCAGA TTGCGGGTGA TGAAGATATC TATGGTGAAA CGGTCCTGAC AGAACCAACG
GAAGTGACCG ACAACGTCTA TCCGGATGAC CCGAACAGGA ATTCCTGGTA TAACGAAGGC
GGTTCCCGTG CGCATGGTCC GTCTGCTGAT GTTGACCTCC CTGCTTTCGC ACCTGCACAT
GTCATTGTAA ACGTATGGTT CTGGCCTTGT GTACGTAGGG TATATGCGCC GGCTTACGTT
GTATGGACTT CTCCCTGGTC ATGGGTCAAC CCTCCTGTAT GGTGGAGATC ATGGCGCCCG
ATGCCGGTAT ACGCCTACCG CCCTGTATGT CACCACTTCA GATATGGTTA TGCCTATGCG
CCGGTACGCA GAATACCGCC TGCACGGGTA ATGTATTATC CTGTCAGAAC CTACTCAGGT
GTGGTATACA GCCGTAACCG CGTAGTAGTC AATGATTACC GTTCTTACAG AGCAGATCGC
GGATATAATC CCGGCCGGTA CAATGGCGGC CGCAATGAAG GTGGCAGAAA TAACTACAAC
GGGTATAATA GTGGCCGTCC TTCGGGTAAC CGTCCCGGCT CCTACGGCAA TAACAATAAT
GGCAATGGCT GGTCAGGTGG TCGTAATAGC AACTATTCTC AGCCTGGTAC AAGAGGATAT
TATTCCGGTG GAAATGACAA TGGTCCGCGC GCCAGTCGTG GTTACCGTGG CAATGGCAGC
TATCAGAGCA CTCCCGGCGG CAACTATTCA GGTGGTCCCC GTGGCAGTTA CCAGACGCCT
CCACGCAGCA ATAACAATAA CAACAATGCG CCCGGCGGAA GAAGCGGCAA CAGCAGCAAC
GACGGACGGG GTGCAGGAAG GGCTGGCAGA ACTAGAAATA CATAA
 
Protein sequence
MKISHSLPVL LLCLSAFTAH AQDPYSRQQL QEQTDEWDEA SWSPPDQDST GLPGDNFSLQ 
GALTLFKQAN TPEEFERLLN TESNKVNNLD LNEDGRIDYL RVINKRKDQV QLFIIQALVS
NQESQDVAVI ELEKTGENTA VIQIAGDEDI YGETVLTEPT EVTDNVYPDD PNRNSWYNEG
GSRAHGPSAD VDLPAFAPAH VIVNVWFWPC VRRVYAPAYV VWTSPWSWVN PPVWWRSWRP
MPVYAYRPVC HHFRYGYAYA PVRRIPPARV MYYPVRTYSG VVYSRNRVVV NDYRSYRADR
GYNPGRYNGG RNEGGRNNYN GYNSGRPSGN RPGSYGNNNN GNGWSGGRNS NYSQPGTRGY
YSGGNDNGPR ASRGYRGNGS YQSTPGGNYS GGPRGSYQTP PRSNNNNNNA PGGRSGNSSN
DGRGAGRAGR TRNT