Gene Cpin_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2353 
Symbol 
ID8358508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2894843 
End bp2896447 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content47% 
IMG OID644964539 
Producthypothetical protein 
Protein accessionYP_003122045 
Protein GI256421392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.992213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAA CTAACCAGGC CGGCCACACC CGGCTAAAGG GAAAACCATG TTGTTATCTC 
ACATATCTTT CTATGAGGGT ATGTGTTCTA TGTATGATCC TGTTGTTGAG CTGTCTGCTG
AATGTAGCAT CTGCACAGCA TCTGACTTTG CGTAATTCCT CACTTGAAGG AAAGCCCGGC
GTTAAAGTAG CGCCTACGGG CTGGCTGGTT GCGGCCAATA CACCGGATGT ATTACCTGGT
GTAATGGGAG TGTTTAAATC TGCTAATGCA GGAAGCACTT TCGTTGGCCT GCAGGGCGGA
CCCGTATATA GGGAAGGTAT TGAGCAGGAG CTGACAGAAC CGCTGGTCGA AGACAGGACT
TACAGTATGT CTTTTGATCT TGCATTCAAT GAAATGTATG GTCATAAACA TTGCTATGGT
AACCTGGCCA TCTTTGGCGG GAGCGCACCC GGTGATACGG CAGAACTATT ATGGACCTCC
GGTAGTTTTA CCGATACTGC CTGGCGCAGA TGGAATGCGA TATTCACACC CAGGCAGACA
CATAATTACA TTGCGTTGTA TGCTTATCCG GCTGAAACAT GTCCTACCAG CAGCTTTGGG
GTACTCGTGT TTGTGGATAA CCTTTCTACG ATCAGACAAA TACTGCGTAC TGAGCTGACG
GCTACCGCTT CCTGTAAGAA TGAAGGAACA GGAAGTGTAC AGGTAAAAGT AAAAGGAGGA
GCGGAGCCTT ATACGTATCT GTGGACACCC GGTAATTATA CGACTTCACA GGTCTCTGAC
CTGTTGCCGG GAATGTATTC GGTGACGGTT ACAGCTGCGA ATGGCGTGAC GGCAAAAGGC
GCTGTAGAGG TAAGCGCTTC TGATCTGCAG ACAGAGAAAG CAGTCACTAT ATCTGATTGC
GCAGGAGAAA ATAAAAGTGC CATTGCATTG GATATAAGCG GCGGACTACC CCCTTACGAT
CTTTCATTGA ATGGAGAGGA AACGCATGCA CGTACATTTA ATCATCTGCG ACCCGGTAAT
TATGTATTTG TATTAAAAGA CCAGCAGGTG TGCCGGGATA CCTTTAATAT TTTTATTCAG
GAACCAGCGC CGCTGGTGAT CAATAAGATT GCTACGGAAC CTTGTAGCTG TAGTGAAGTG
AATGATGGGA TCATCCGCTG GGAAGTAGAT GGTGGCACAC GTCCGTATAA ATATCGTGTC
AACGGTGAAG CATGGCAGCC TGATAGTTTA CAGCGTAATC TCAAAGCCGG TGATTATCGC
TATGAAGTAG AAGATGCGAA TGGTTGTGCT GATGGTGGAA ATACAGTGAT CACTTCTCCT
AATCAGCATT GTTTTGTGAT GATGCCATCT GCGTTTAGTC CTAACAGTGA TGGTTCCAAT
GATGTGTTTC GTCCGAGGAT CTATGATGCA GTGACTAATT ATCGTCTGAG TATTTTTAAC
CGCTGGGGCA GTCTGGTATT TCAGACGAGC GATCCTAAGG CAGGTTGGGA TGGTTATTCC
CGGGGTGTTG CGCAGACCCC GCAGTCATTT GTATATGTCT GTACATTCAC GACCAGCAAA
AATGAACCGA AGGAATACAG GGGTTCAGTG ATGCTTGTGA AATAG
 
Protein sequence
MIVTNQAGHT RLKGKPCCYL TYLSMRVCVL CMILLLSCLL NVASAQHLTL RNSSLEGKPG 
VKVAPTGWLV AANTPDVLPG VMGVFKSANA GSTFVGLQGG PVYREGIEQE LTEPLVEDRT
YSMSFDLAFN EMYGHKHCYG NLAIFGGSAP GDTAELLWTS GSFTDTAWRR WNAIFTPRQT
HNYIALYAYP AETCPTSSFG VLVFVDNLST IRQILRTELT ATASCKNEGT GSVQVKVKGG
AEPYTYLWTP GNYTTSQVSD LLPGMYSVTV TAANGVTAKG AVEVSASDLQ TEKAVTISDC
AGENKSAIAL DISGGLPPYD LSLNGEETHA RTFNHLRPGN YVFVLKDQQV CRDTFNIFIQ
EPAPLVINKI ATEPCSCSEV NDGIIRWEVD GGTRPYKYRV NGEAWQPDSL QRNLKAGDYR
YEVEDANGCA DGGNTVITSP NQHCFVMMPS AFSPNSDGSN DVFRPRIYDA VTNYRLSIFN
RWGSLVFQTS DPKAGWDGYS RGVAQTPQSF VYVCTFTTSK NEPKEYRGSV MLVK