Gene Cpin_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2325 
Symbol 
ID8358480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2863933 
End bp2865048 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content49% 
IMG OID644964511 
Producthypothetical protein 
Protein accessionYP_003122017 
Protein GI256421364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.653501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACTAC AGCAATACAT ACAGGAAATT TTGTTCAGGC AGCATATCTG TTGCCTGCCC 
CAACTAGGCG TGTTCAGACT GACACATACA CCCGCTCGTT ACGATGTTAC CAGCAAAACG
ATATTACCCC CAGGAGAGAT CATTACTTTT GACGAGACAT TGACTAATGA CGGCGGCCTG
TTGGATTGGA TTTCGCAAAA GGAGCACCTG GTGCCCGCTA TTGCGCAATT GAAAATGGAG
AAATACCTGG ATGATTTCAG GAAAGTACTT AAAAATGGCG AAGCAATCGT CATTCCGGGT
GTCGGACAAC TACAGGCAAA CACTGTAGGC AGGATTTCCT TTGAACAGGA ACCTCCGGCC
CTGACTCGTG ATGTGCTGCA TGTAAGTCCG GTAATACGCC AGGATGCAAT TCATAAGGTG
ACTGTAGGAA ACAGGGAAAT GGTGGGTAAA CAGGTGGTTG ACCACCTGAC AGCATCGCCG
TCCTCCTCTT CGTCTTCGTC CGCTCCTGCG CCAACGCCCA CGCCGGAACC AGTTGCAGCT
ACAACAACGC CTTCCACTCC GGCGCCTTCC GTGACCACTG GCGCTACCGG AACGACCGGC
ACAAGCGGCA ATGACTACGA ATATGAATAT GCCCAGGAAA TCCCTTCCAA ATTACGCTGG
TTATGGGTCG CTATTCCTGT AGCCTGTGTG GTAACAGCTG GTATTGTATG GTATTCTGTT
AATAAGAACC GTCCTCAGAT CACAAGAGCG GAAAGTGCGG TGAACCCTGC CCCTGTAGAG
GCGGCCCCCG TTGCTTCCAG TCAGGCAAAA GCTGACAGTG CAGAAAAAGC AGCAGCTACA
GCTGCCGCAG CAGCCAGTGC ACAGGAGATG GCTTATGATG TCATTTTTGC TACTTATAAG
ACCAGGAAAG GTGCTGAAGA TATGTTCAAA AAGCAATCAA GCTGGCAGAA AGACAAACCA
GTAAAATTCG TTTTACTGGC CAATGCAGAC TCTTCTTCCT TCATGGTAGC AGAGCAATTC
AACACACCTG CCGCGGATAC GACAGCTGTA AAGGACTCTA TCCAGCAAAA GTACAAGCCT
AAGTTCAAGG TGTTTATCCA ACCATCGAAG CAATAG
 
Protein sequence
MVLQQYIQEI LFRQHICCLP QLGVFRLTHT PARYDVTSKT ILPPGEIITF DETLTNDGGL 
LDWISQKEHL VPAIAQLKME KYLDDFRKVL KNGEAIVIPG VGQLQANTVG RISFEQEPPA
LTRDVLHVSP VIRQDAIHKV TVGNREMVGK QVVDHLTASP SSSSSSSAPA PTPTPEPVAA
TTTPSTPAPS VTTGATGTTG TSGNDYEYEY AQEIPSKLRW LWVAIPVACV VTAGIVWYSV
NKNRPQITRA ESAVNPAPVE AAPVASSQAK ADSAEKAAAT AAAAASAQEM AYDVIFATYK
TRKGAEDMFK KQSSWQKDKP VKFVLLANAD SSSFMVAEQF NTPAADTTAV KDSIQQKYKP
KFKVFIQPSK Q