| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2304 |
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| Symbol | |
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| ID | 8358459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2838824 |
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| End bp | 2839900 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964490 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003121996 |
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| Protein GI | 256421343 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTATCC AACTCAAAAT ATTGTTTGTT GTCAGTCTCT GGCTATGCCC ATTGACAGGC
AGCGCCCAGC AGGTGAATTT CTGCGGGGAA TTCGTGCCTA TGGAGCGCGA TTTCGTTTCC
TACAAATTAA TGGACGTCAT CAAGGGGCAT CTGAAGTACC GCAATTTTCT GCCGGTATTG
AAGGCGAAGA CGGACATCTA TTTCCCTGTG ATCATTCCCA TACTGCATCA GTATAATATA
CCAGAAGATT TTAAGTACCT GCCTGTAGTA GAGAGTGGTT TTACCAATGC CACCTCTGCT
GTAGGCGCAC AGGGCGTATG GCAATTTATG CCTGAAACCG CAGCAGCTAT GGGACTGGAA
GTAAGATATG ACAATGATGA ACGTAATCAT CTGCTGAAAT CAACACATGC CGCCTGTCGT
TATCTGCAAC AATTATATAG TCAGCTGCAC TCCTGGACAT TGGCGGCAGC AGCATATAAT
GCAGGCGCAG GTAATATTTC CCGTAATATG AAAAGACAGG GGAGTAGTGA TTACTATCAG
CTGGTGCTGA ATGATGAAAC TGCACAGTAT ATCTATAAGA TCATTGCTAT CAAGCAGCTG
TTTGAAAGCC CTGAATTATA TATGCCAGGC TTTGGATACA ATGTTTTCAA CAAAGGCAAT
GCAAATATGT CTGTGTTTTC CACACCGGCT TCCAGTATAC GTCAGCCGGG AGAAGCAGCG
AATAAACAAG TGGAAAATAA CTCAGGGGAT TTTAAATCTA TCCGTATTAC AGTCGATACG
AAAACCCGTG GCAAACTACC GGTAGCAAGT GCTGCTTTCG CCGCGAAACT GCAGAAGAAT
AATACGTTTG AAGATGGTCA GCTGATCAGT GTTCTACTAC TGGATGACTT ACAGGCCAAT
GGTGTGTATA TCCGTAAGAA TACAAAGATT TCAGGTCGCG GCTGGATCGT CAGTAATCGT
ATTTATGTAG ATCTTGGTTT TGGAAATACG ATTACTTTAT GTGATGCAGG TGGAAAGAAA
GGAGTGCCGG CTGATGCCTT GAAGGCAGGG CGGGATGTGA GGTTGTTGAA GATATAG
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| Protein sequence | MRIQLKILFV VSLWLCPLTG SAQQVNFCGE FVPMERDFVS YKLMDVIKGH LKYRNFLPVL
KAKTDIYFPV IIPILHQYNI PEDFKYLPVV ESGFTNATSA VGAQGVWQFM PETAAAMGLE
VRYDNDERNH LLKSTHAACR YLQQLYSQLH SWTLAAAAYN AGAGNISRNM KRQGSSDYYQ
LVLNDETAQY IYKIIAIKQL FESPELYMPG FGYNVFNKGN ANMSVFSTPA SSIRQPGEAA
NKQVENNSGD FKSIRITVDT KTRGKLPVAS AAFAAKLQKN NTFEDGQLIS VLLLDDLQAN
GVYIRKNTKI SGRGWIVSNR IYVDLGFGNT ITLCDAGGKK GVPADALKAG RDVRLLKI
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