Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2273 |
Symbol | |
ID | 8358428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2801193 |
End bp | 2802641 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964459 |
Product | hypothetical protein |
Protein accession | YP_003121965 |
Protein GI | 256421312 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.43278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA AGATACTATT CGTCATACTG TTGCTGAGTT GTGTCACACT ATCTGCACAG CAAAAGCAAA GCCCATATGC AGCGAAAATC AGCCGGGTGC TGAAACGTAT GCCTGCAAAT AATCAATTAC AGCTGGATAG CTGTATGCAG CAGATAACAG CGCTTGGTGT TAACGGACTA ACTGAAATGG CCTGTATGCT GCGTCCTCCG GGAAAAGGAG ACAACACGGC CCTGCAATAT GCATTAAATG GTTATGCAAA TTACGTGGCT GCTGCTACCA GAGATTCGCT GCGTAGCAAA GCCATAAAAG CATGGGGCAA AGCGCTTAAA CTGACCACTG ATGCAAGCGC TAAAATATTT CTTATAGAAC AGTTACAGTT CTTCGGAGAC AATACGGCTA TCCCATTATT AAAGCCCTGC TTACTGCAGC CTCGTTATGC CGATCCTGCT GTCCGTGTGC TGTCGCAGAT AAAAACTTCT GCCTCACTGA TCGCTATGGA GCTGGCTTTG GATAAAGCAA AAGGTAATAG CGAAATAGCC CTGGTAAAAG CCCTGGGTGA TCGTCGGTAT ATCGCTGCTG AAGGTGCGGT CACATTACGT ACCTCTTCAC CTGATCCGGT ACTGAAAAGA ACCGCATTGT TTGCGTTGGC AGATATTGCC AGCGAGGACA GTGAGCCAGT ATTATTTGCC GCAGCTGAAA AAGTAAACTT CGCCTATGAC TCAACAGGCG CAACAGCGGC CTATCTCTTG TTTATCGATC ATCTTGGTCA TAACTGGCCA ACTGCGCCGG CACAGGCGGC TGCTAACAAG GTACTCCGGC AATGCAAAGG AGATAGTCTT TCACACGTAC GTATCGCTGC ATTAAAAACG ATTGTGGATA TCATGGGGGA TAATGCAACT AATACATTAA CGCTGGCTGC CGACAATAAA GATCTGCAAT ATGCAGCAGC AGCGCTGGCA ATGGCTGGAA GATTCATGAA CGCAGCTAAT GCCGATATCT GGTTACAAAA GGGCGAGCGC TCACAACCCG CCACCAAAGC GGCTGTTATC ACTATGTTGG CGGCTACTAA ACAACGTGTT GCAATATCAT TGTGTACAAA AGCGTTAAAA GACAGTGATG CGCGCGTAAG GATGGCCGCC ATTGAAGCCA GTGCGCAAAT GCAGAGCCCC GAGATGTTGA GTCCTTTGCT GGTAGCCATG AAAACGGCTG ATTCCACAGA GGTAAAAGCC ATCGGGAATA GCCTCTTGAG TATCAGAAGC AGAGATGTGT CCGGTTATGT TGCAGTCGCG TTACAACATG CACCTCCCTT TGCTCAGATC ACCTTATTAC ATGTACTGGC ATATAAAAAG GCAGCAGACA AGGAACGCTT TATCCGCCTG TTGCTGGATA ACGAAAATCC GGATGTAGCA GCAGCTGCTA AAACTACACT GGAGGCCGTC AAAGAGTAA
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Protein sequence | MKTKILFVIL LLSCVTLSAQ QKQSPYAAKI SRVLKRMPAN NQLQLDSCMQ QITALGVNGL TEMACMLRPP GKGDNTALQY ALNGYANYVA AATRDSLRSK AIKAWGKALK LTTDASAKIF LIEQLQFFGD NTAIPLLKPC LLQPRYADPA VRVLSQIKTS ASLIAMELAL DKAKGNSEIA LVKALGDRRY IAAEGAVTLR TSSPDPVLKR TALFALADIA SEDSEPVLFA AAEKVNFAYD STGATAAYLL FIDHLGHNWP TAPAQAAANK VLRQCKGDSL SHVRIAALKT IVDIMGDNAT NTLTLAADNK DLQYAAAALA MAGRFMNAAN ADIWLQKGER SQPATKAAVI TMLAATKQRV AISLCTKALK DSDARVRMAA IEASAQMQSP EMLSPLLVAM KTADSTEVKA IGNSLLSIRS RDVSGYVAVA LQHAPPFAQI TLLHVLAYKK AADKERFIRL LLDNENPDVA AAAKTTLEAV KE
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