| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2207 |
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| Symbol | |
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| ID | 8358359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2726540 |
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| End bp | 2728501 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964391 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003121900 |
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| Protein GI | 256421247 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000576072 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATGA AGGAAAATAT ACTGATCGTC GAAGATGAAT TTATCGTAGG CAATGATCTC
AGATTGATGC TGATCAGGGC AGGATACGCC GTTTGTGGCA TCGCTGCTTC CGTGGATGAG
GCCAAAGCCA TGATAGAGCG GAATAAACCG AGTTGGGTAT TGCTGGATAT CTTTCTGCTG
GATGGATCAT TAGGAACTGA TCTGGCTGGA TATCTCCGCC AGAAAAATAT CGGCTTTATA
TACATCTCTG CAAATACGAA TCAAAGTATA CTGGAAATTG CGCGTGCTAC CAGGCCATAC
GGCTTCCTGG TGAAACCTTT CCGGGAAAAG GACCTGCTCA TCATGCTGGA TATCGCCAGA
TACAAACACC AGAATAACTT GCAGATGGCA CTGCAACGGG AGCAGTTAAT GCAAAAACAA
TTGCAGCAGA TCATTGAGGC GCCCTTTGAA CTGGCTGATA AGATTGCCCG TATCCCTGAT
GTTTTACAGA CATTTGTCCC GTTTGACTAT CTCCATATTG CCATCACCGG TAAAAGACCG
CATACGCTGG AAGATCTGAG TTTCCAGCGG ACAGGCTTCG ATGAGTATGA ACACCTGGAC
AATACCGCAC TGTGTAAGTC TTTGGGGCTG GAAAGAAATA CTATCCTTAC CGGAAGAATT
GCACAACTGG AAAATGAAAC AGGCGGGTAT CTGAGTGATG CTGAATTCAG GCAATGGATA
GCTGACAAAA TATGGGAAAG TAAACTAAGT GATCATCTCC GTCTAAACGC CAGACTGGCT
ATTGCTGTTA CGCTGCCGGC CGGTAATCTG GCCGTCATTT CTTTTTACAG CCGTAATGCC
GACACGTATA CGGAAGAGCT GTTTACATTG CTGGGAAGAA TGGAAAACGG TATCCGTCAG
TTGCTGGAAC AGATCCAGCA AAAGAATGAT GCCCTGAGTG CCCGTATTGT TGCCAGAAAA
CGTGTGGAAA AGCCGCTTAT AGACAATGAA GTCTTGTTTG AAGGGATCGT TGGTCGCAGT
CCTGTTTTTC TGAGTGTATT ACATAGTATC AACATGGTGT CCGCAGCGCC AAGTTCTGTA
CTGATACTGG GAGAAAGTGG TACAGGTAAG GAACTGATTG CGCGATGTAT ACACCGGCAG
TCTCCCCGTA AGAATAAACC ATTGATCACG GTGAATTGTG CCGCCTTACC TGCTGAGCTG
ATAGAATCTG AGTTGTTTGG GCATGAGAAA GGCGCATTTA CAGGTGCGAC TGATAAACGT
GCAGGTAAAT TTGAAATGGC AGACGGTGGT ACGATCTTCC TGGATGAAAT AGGTGAACTG
CCTATAGAAT CCCAGGTAAA GCTGCTGCGT GTTTTGCAGG AGAAAGAGTT CGAAAGGGTC
GGAGGGAGTA AGGTCATCAA GGTAGATGTA CGTGTGATTG CTGCTACGAA CAGAAACCTG
GAGAAAGAAG TGGCGGAAGG TCGTTTCCGT CTGGATCTAT ATTACCGCCT GAATGTATTC
CCTGTAGAAT TACCATCACT CAGAGAGCGT AAAGAAGATA TACCTTTGCT GGCACAACAT
TTTGTGGATA AACTATCTGA GAAGCTAAGC CGTAATATTA CAGATATCAG TCCTGATGCC
TTAAAAGCTT TACGGTCATA CGACTGGCCC GGAAACATCC GTGAAATGGA ACATGTGATG
GAAAGGAGCC TGCTAATGAC GACGGGCACT ATCCTGAAAC AGATTATGCT GCCTAAAATG
GCTGCGCAAC CGGTAGGAAC CACTATTTCA TCGGCTGATG GAAACAGGAT CAAAACCCTG
GAGGAAATGG AAATAGAACA TATCCTGCAG GTGTTGAAAA GCTGTAAGGG AAAAGTATGT
GGTGTTGGTG GCGCTGCAGA GTTATTAGGG CTGCCGCCCA GTACCCTGAA TTCCAAGATC
AGGAAGCTGG GCATTAAGAG AGATTTTCAC TTTAAGGATT AA
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| Protein sequence | MTMKENILIV EDEFIVGNDL RLMLIRAGYA VCGIAASVDE AKAMIERNKP SWVLLDIFLL
DGSLGTDLAG YLRQKNIGFI YISANTNQSI LEIARATRPY GFLVKPFREK DLLIMLDIAR
YKHQNNLQMA LQREQLMQKQ LQQIIEAPFE LADKIARIPD VLQTFVPFDY LHIAITGKRP
HTLEDLSFQR TGFDEYEHLD NTALCKSLGL ERNTILTGRI AQLENETGGY LSDAEFRQWI
ADKIWESKLS DHLRLNARLA IAVTLPAGNL AVISFYSRNA DTYTEELFTL LGRMENGIRQ
LLEQIQQKND ALSARIVARK RVEKPLIDNE VLFEGIVGRS PVFLSVLHSI NMVSAAPSSV
LILGESGTGK ELIARCIHRQ SPRKNKPLIT VNCAALPAEL IESELFGHEK GAFTGATDKR
AGKFEMADGG TIFLDEIGEL PIESQVKLLR VLQEKEFERV GGSKVIKVDV RVIAATNRNL
EKEVAEGRFR LDLYYRLNVF PVELPSLRER KEDIPLLAQH FVDKLSEKLS RNITDISPDA
LKALRSYDWP GNIREMEHVM ERSLLMTTGT ILKQIMLPKM AAQPVGTTIS SADGNRIKTL
EEMEIEHILQ VLKSCKGKVC GVGGAAELLG LPPSTLNSKI RKLGIKRDFH FKD
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