Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2190 |
Symbol | |
ID | 8358342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2693059 |
End bp | 2694066 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964374 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003121883 |
Protein GI | 256421230 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0300153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000017551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAGAACA GGAAGGAATA CCTAAAGCAA CTGTTGCAAC AAAAGGAGTG GAAACAGGAA GACCGGGATT GGCTGCTGCA GTATTTAAAT GAGAACGATC TAACGGATCT GAAGGATGCA GCATCAGCAG CATATGAGGC TGACCTGCAA AGCACAGACC CAGTATTGGA ACGAGAACAC TCAGCGCGCA TACTGGAGCA GATACATCAG CGCATCAGCT TACCGAAGGG CGCTGTTGTG AGAAGTATGT GGTTCAGTCG CTGGAAAGTA GCTGCTGCCG CCATTATTAT CCTGGTTGCA GGAGCAGGCA TTCTGAGCCT GTTCAGAAAA CCCGTAAAAC AGCTTTTAGT TACAGCGGAG AAACAACGGA AGACATTTAC ACTGCCCGAT GGGACTATTG TGTATCTGGA ACCCGGAACG ACTATACAGT ATGCTACCAG CTATGGTAAA GAAGAACGTA ATGTGACACT GACAGGTGAG GCACTGTTTA AGGTAGAAAA AGATGATGCA CATCCATTTA TTGTAGCATC ATCGCTGATC AGCACCAGGG TATTGGGTAC CTCTTTTAAT ATGGAGGTGA GAAACAGTTC TGAGGCAAAA GTAGTGGTGC TGAATGGTAT GGTACAGGTG GAGGCAAAAG GAGAGGAGAA CCAGCAGGGA AAGGAGCTGA TCCTGACAGC CAACAAGAGT GCGGTATATA ACAAGGACAC GCATCTGCTT GAAATGTCTG ATGCCACAGA TGATGCACGG TTTTATTCGC AGAAACAACA AGGACGGTTT GTATATGATG GAGAAGAACT TATAAAAGTA GTAAACGACC TGCAGAGATA TTATAACGCG GAGATCAGAT TAGATAAACG AATACAGCAC TGTGCATTTT ATGGAGATGT AAACATTGTG GATGACCTGG AGAAGGCACT CGATCTGATC GCAGTGTCGC TGAACGCCAA AATCAATAAG GATAAAAATG GAAACGGCTA TATGATTGCC GGAGGTAACT GTCAATAG
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Protein sequence | MQNRKEYLKQ LLQQKEWKQE DRDWLLQYLN ENDLTDLKDA ASAAYEADLQ STDPVLEREH SARILEQIHQ RISLPKGAVV RSMWFSRWKV AAAAIIILVA GAGILSLFRK PVKQLLVTAE KQRKTFTLPD GTIVYLEPGT TIQYATSYGK EERNVTLTGE ALFKVEKDDA HPFIVASSLI STRVLGTSFN MEVRNSSEAK VVVLNGMVQV EAKGEENQQG KELILTANKS AVYNKDTHLL EMSDATDDAR FYSQKQQGRF VYDGEELIKV VNDLQRYYNA EIRLDKRIQH CAFYGDVNIV DDLEKALDLI AVSLNAKINK DKNGNGYMIA GGNCQ
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