| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2184 |
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| Symbol | |
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| ID | 8358336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2681099 |
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| End bp | 2685187 |
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| Gene Length | 4089 bp |
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| Protein Length | 1362 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964368 |
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| Product | Chitinase |
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| Protein accession | YP_003121877 |
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| Protein GI | 256421224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00723588 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAA ATTCTACCTT TCGTAGCGCG GTGTCTTACC ATTATGTAAG ACATGCATTG
CTGCTTTTAC TGCTCATGAT GGGACTTTCC CCGCTCATGG CGCAGGTAAC TCCGCAGGTG
CCCGCTACCA CGAAGAACCA CAGCAAGCAG GTGATAGGCT ATATCACCCA ATGGGATGCG
TGGAAAGATG TTGCCGGCAT CGTTCCCAAA GGGGGCTATA ACCAGCTGAA TGTGGACTAT
TCGCAGTACA CTATCCTAAA CTTTTCTTTC TTTGGCGTGG CCAAAGACGG TTCCTTACAC
AGCGGGGACT TTCGTAACAA AAACATCTAC CAGGTAGGCG CCGTACAGGA GCCGGGTGCA
CTGGTAAATG AAGATATCTA CAGCAGCTGG GATATGTTCC TGTTATACGG TGAACTGGAT
GCTCCACTGT ATTATATTTC AGAAGGAAGC TATGCCTACA CGCTTGGCTA CCGTAATGAA
GGCAGTGGCT GGAAGAATGT TAATACCGGC AAAACCGGTG TATTCCCTTT ATCTGTACCT
AAACAGGGTG GCGCACAGGG CGTACTTGAC CTGGCTCACT CCAAAGGGGT AAAAGTAATG
GCTTCTATCG GTGGATGGAG CATGTGTAAA CACTATCCTG AAATGGCAGC TGATGCCACC
AAACGTGCGA AATTCGTAGC TGGTTGCGTT GAGCTGATGA ACATGGGCTT TGATGGTATC
GATTTCGACT GGGAATATCC GAATGATCCG GGTATGAACA TCGAAAGATA CAGCACTGCC
GATTATAATA ACTTCGCTGC ACTGGTAGAA GCGGTAAGAA CTGCAATCGG TCCTAATAAA
CTGATCACTG CTGCTTTCGC TGCTTCTCCT GCTAAACTGC AGGGTTTTAA CTGGTCCCGT
CTTAATAATT CCATGAATTA TTATAACATG ATGACCTACG ACTACAATGG CGGATGGTCT
AACAAAGCCG GTCATAATGC GCCCCTGTAC GATTACCCAG GTGCAGAATA CACTAACTTC
TCTGTTGATG CAACTGTAAA AGCACTGAAA GCACTGGGCG TGAATATGTC TAAAGTAAAT
ATCGGTGCGC CTTTCTATGG TCGTGGTGTA GTGACTTCCG GTGCAGCTGC ACTGAATGGC
GCTACTACTA AACGCGCTGA GACTGTGCAA CCGGATGGTC CTATCCAGAC CTGTGCCGAC
TACACTAACT GGGCGAAAGA CCTCTGGGAT GGTACGCCTA ACTACAGCTA TATCCTGCAA
CAGACTTCTT CCGGCTGGAC TGAAGGATGG GATGATGTAG CGAAAGTACC TTATAAAACG
AAAGGCAACT ATTTCCTGAG CTATGATAAC GAGCGCTCTG TAGGTGAAAA GGCCAAATAT
ATCAAGGACA ATGGACTGGC AGGTGTGATC ATCTGGCAGG TATACGGCGA CATGCTGAAC
ATGACCAGCA GTACCGTTGC TAAGGGCAAG CTTATCTATT GTCCTAATAC TACTTCTCCG
CTTGTTAACA AAATCAATGC TGTTTTTGCT GATGGTAGCA CACCTGTAAA TCAGGCGCCT
GTAGTGAACC TGACCGCACC AACAGCAAAT GCTACTTTTA CTGCGCCTGC AAGTATCACT
GTCAGCGCTA ATGCTACTGA CAGCGATGGC AGCATCAGAA GAGTACAGTT TTATAATGGC
GGTACCAGCC TGGGCATTGA CTCTGTAGCG CCATACAGCG TTTCATGGAG CAATGTAGCG
GCAGGTACTT ACAGCATCAC TGCTGTAGCT ACTGATAACA GTGGCGCAAG CACTACTTCT
GCTGCTGTAT CTGTTACAGT GACAGGCGGT GGTACTAACC CTCCGGTTGA TAACAACAAA
GTAGTAGTAG GTTACTGGCA GAACTGGAAC CTTGCTTCCG CTCCGTACAT CCGTCTGCGC
GATGTAGACA GCCGTTATAA TGTGATTGAA GTTGCGTTTG GTACAACCAG CAGCGATCTG
TCTACTGTGA ATTTTACTCC GGAAGGAACA ACCGTAGCTG ACTTCAAAGC AGATATCGCT
ACATTACAGG CACAGGGCAG AAAAGTATTA CTGTCTTTGG GTGGTGAAAC CGGTACACTG
GTGATCAACA CAGAAGCCAA TAAGCAAGCT TTCATCTCCA GCATGAAGAA CCTGCTGGAT
AGCTACAACT TCGATGGTTT CGACCTGGAT ATCGAAGGTG GTACTTCCTT ACAGCTGAAT
AATGGTGATA ACAACTTCAT GGCGCCAACT ACGCCTAAAG TAGTTAACCT GATCGCTGCT
GCAAAAGAGA TCATCTCTTA CCGTAAGGCA CAGGGTAAAA ACTGTCTGCT GACCATGGCG
CCTGAAACAT ATTATGTACA GACCGCTTAT GGCGCAACAT ATTCTCCGCT GGTAGGTGCA
TATCTGCCAA TCATTTACGG TCTGCGTAAC GAACTGTCCT GGATCCAGCC ACAGTTATAC
AATACCGGTT CTGTAATGGG CCTGGATAAT AAAGTATACA ACTCTACTAC TGCTGACTTT
ATCGTGTCTA TGACTGAAAT GCTGTTGCAG GGCTTCCCGG TATCAGGTAC CAGTCAGACA
TTCCCTGCAC TGCGTGAAGA TCAGGTAGCT TTCGGTCTGC CAGCTGCACC AGGTGCTGCA
GGTAGTGGTT ACACTGCTCC GGCAGAAGTG AAAAAAGCAC TGAATTATCT GACTAAAGGT
CAGTCTTACG GTGGTACTTA TGTGATCCGT AAAGCAGCTG GTTATCCTGG TCTGCGTGGT
ATCATGACCT GGTCAGTGAA CTGGGATAAA GTAAACAATA GTGAGTTTGC TGCAAACTAT
TATCCGTATT TCTTCGGTAC TACGCCGGGC AATCAGTCTC CGGTTGTAAG TATCACTTCT
CCGGCTTCCG GAGCATCTTT CACAGCGCCT GCTTCTATCA CAATTACGGC AAGTGCTTCA
GATGCTGACG GTTCTATTGC TAAAGTTGAA TTCTACAATG GTGCGACCAA ACTGGGTCAG
GCTACGGCAG CACCTTATTC CTATACCTGG ACGAACGTAG CTGCGGCTAC TTACAGCTTA
ACAGCTGTAG CAACTGATAA TGCCGGCGCC GTAACAACCT CCGCTGCGGT ATCTGTTACA
GTAAATGGTA CTGGTGGTAA TACCTGCGAT GGTATTGCTG CGTGGTCAGC TACTATTGCA
TATAATGGCA GCCAGCAGGT AGTGTACAAC GGTAAGATCT ACACTGCAAA ATGGTGGACA
CAGGGCGACC AGCCTGATAC GCACAGTGGT GCTGACCAGG TTTGGGCTTA TGTACGTGAT
TGTGGCGGTA GTAATCCTGG TAATCAGGCT CCGACAGTAA GCATCACTTC TCCATCAGCA
GGCGCTTCTT TCTCTGCTCC GGCTACAGTA ACCATCCAGG CTACTGCTGC AGATGCAGAC
GGTACAATTG CCAAAGTTGA ATTCTACAAT GGCAACACCA AACTGGGAGA AGTAACTGCA
AGCCCATACA GTTATACATG GGGTAACGTA GCTGCTGGTG CTTACAGCAT CACAGCTGTA
GCAACTGACA ATGGCAGCAA GTCTACAACC AGCGCTGCTG TAGCTATCCA GGTAGGTAGC
GGCAACACAG GTAACTGTGC GGGCGTAGCT GCTTATGAGC CTTTCCCGAA AGTATATAAC
CAGGGAGATA AGGTAGTGTA TAACGGTGTC CTGTACGAAA GCCAGTCAAA TGGTCTGTAC
AACGTAACGC CTGGTACTGC TGACTGGTGG TGGAAACCAC TGGGTGCATG TGGTGCGGCG
GCAAGAGTAG CTGTAGTATC TCCTGAACCT GATGGTGTTA ACGCAGACAG CAAACTGGTC
GTATTCCCTA ACCCGCTGAC AGGTACTGTG CTGAAAGTAC AGATCAATGC TGCACAGGGT
GAGAAAGTAC TGATCGAACT GTGGAGTACG AATGGTAACG CTATCCTACG TAAACAGATC
GTCGCAGGCG CTAAAGGTCA GCAGACCGTT GATCTGGATG TGTCTCAGGT ACCAGCAGGT
TCCTGGATAC TGAAAACCAG CAATCAGCAG AGCGGCCGTA AAAGTGCTGC GAAGGTGATA
AGATTATAA
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| Protein sequence | MKVNSTFRSA VSYHYVRHAL LLLLLMMGLS PLMAQVTPQV PATTKNHSKQ VIGYITQWDA
WKDVAGIVPK GGYNQLNVDY SQYTILNFSF FGVAKDGSLH SGDFRNKNIY QVGAVQEPGA
LVNEDIYSSW DMFLLYGELD APLYYISEGS YAYTLGYRNE GSGWKNVNTG KTGVFPLSVP
KQGGAQGVLD LAHSKGVKVM ASIGGWSMCK HYPEMAADAT KRAKFVAGCV ELMNMGFDGI
DFDWEYPNDP GMNIERYSTA DYNNFAALVE AVRTAIGPNK LITAAFAASP AKLQGFNWSR
LNNSMNYYNM MTYDYNGGWS NKAGHNAPLY DYPGAEYTNF SVDATVKALK ALGVNMSKVN
IGAPFYGRGV VTSGAAALNG ATTKRAETVQ PDGPIQTCAD YTNWAKDLWD GTPNYSYILQ
QTSSGWTEGW DDVAKVPYKT KGNYFLSYDN ERSVGEKAKY IKDNGLAGVI IWQVYGDMLN
MTSSTVAKGK LIYCPNTTSP LVNKINAVFA DGSTPVNQAP VVNLTAPTAN ATFTAPASIT
VSANATDSDG SIRRVQFYNG GTSLGIDSVA PYSVSWSNVA AGTYSITAVA TDNSGASTTS
AAVSVTVTGG GTNPPVDNNK VVVGYWQNWN LASAPYIRLR DVDSRYNVIE VAFGTTSSDL
STVNFTPEGT TVADFKADIA TLQAQGRKVL LSLGGETGTL VINTEANKQA FISSMKNLLD
SYNFDGFDLD IEGGTSLQLN NGDNNFMAPT TPKVVNLIAA AKEIISYRKA QGKNCLLTMA
PETYYVQTAY GATYSPLVGA YLPIIYGLRN ELSWIQPQLY NTGSVMGLDN KVYNSTTADF
IVSMTEMLLQ GFPVSGTSQT FPALREDQVA FGLPAAPGAA GSGYTAPAEV KKALNYLTKG
QSYGGTYVIR KAAGYPGLRG IMTWSVNWDK VNNSEFAANY YPYFFGTTPG NQSPVVSITS
PASGASFTAP ASITITASAS DADGSIAKVE FYNGATKLGQ ATAAPYSYTW TNVAAATYSL
TAVATDNAGA VTTSAAVSVT VNGTGGNTCD GIAAWSATIA YNGSQQVVYN GKIYTAKWWT
QGDQPDTHSG ADQVWAYVRD CGGSNPGNQA PTVSITSPSA GASFSAPATV TIQATAADAD
GTIAKVEFYN GNTKLGEVTA SPYSYTWGNV AAGAYSITAV ATDNGSKSTT SAAVAIQVGS
GNTGNCAGVA AYEPFPKVYN QGDKVVYNGV LYESQSNGLY NVTPGTADWW WKPLGACGAA
ARVAVVSPEP DGVNADSKLV VFPNPLTGTV LKVQINAAQG EKVLIELWST NGNAILRKQI
VAGAKGQQTV DLDVSQVPAG SWILKTSNQQ SGRKSAAKVI RL
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