Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2183 |
Symbol | |
ID | 8358335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2678445 |
End bp | 2680781 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964367 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003121876 |
Protein GI | 256421223 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.480779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0613811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACGAC GTTGTTACGC GATATTATTG TGCACCACTC TGACGGTTCC GGTGATGCTG TATGGCCAGG AGCAGAAAAG CGTTCGGGTA AGAGCTGATG AAGCTTTTGA AAGACAGGAA TATGCTGTAG CGGCATCTCT GTATGGAAGG ATCATTAATA AAAAGAAAGA TAAAACTTCC ATAGATCTGC TGCAACGTAT CGCACTCTGC AACCGGGAAA TCGGTCAGTA TGAGGATGCT GCTTTCTGGT ATGAGAAAAT GGTCGACCGT CCGGATTGTC CGCCAGTGAC ATATCTGCAA TACGGAGAAG TCCTGAAGAG TGTGGGTAAA TATGTTGAAG CAAAACAGCA GATCACCAAA TTCACTACCG GGAAACAGGA TAGTCTCAGA CTGAAGAATG TGATGATGGC GGGTTGTGAT AGTGCTATCG TCTGGAAATC CGGCCGTCTG GATATGGCGA TGGAAAATAT CAAGGAACTC AGTTCTTCCG GTTCTGATTA TGTAAGCGGG GTAACAAGAC AGGGTTTGCT GCTGGTATCC AACGGTTATC GTAAAATGAC CATGAATCTG TTGCCAGAGC GTAACCCGGC GATTGACACA CGTACGAATC AGCCTTATTA CAAAGCATAT ATTTTCAAAC AATATTCCCA GGGTGTGGCC AACACTTTCG TAGAAGAAGT AGTGCCGCAA TTATTAGCCC TGGTGCCTTA TCACATCGGC CCCGTTTGTT TCAACGCAAG AGAGGATACC ATTTACGTTA CACTGAACTC CTGGCAGCAG GATATTGCCA ACCGTAAAAA ACGCGGTCCG GTAAATGGGG AACGTGTAAT GATGGTGTTC TGGTCAGTGA AAACAGGCGA CGACTGGAGA CCGCTGGAGC CACTGAGGGA GATCAATGCT CCTGGTTCCT CTACTGGTCA CGTGGCATTG AGCCGTGATG GTAAAACCAT GTACTTTGCT TCCAACAGAA AGGGCGGACA GGGTAGAATG GACATCTGGT TCAGCGAAAA ACAAAAGAAC GGCAGATGGG GTAAACCTAA GAACTGCGGT CCGATCATCA ACACTCCTTT CGACGAAGCA TTCCCTACCT ATAATGAAGA TAACATGCTT TATTTCTCCA GTAAGGGACA CCCCGGCCTG GGAGGGTTTG ATATGTTCCG TATAAAAGGT AAAGGCGCTG AATGGACCCG TTTGCAGAAC CTTCGTTATC CTTTCAACTC CGGTGGCGAT GATCTGGGTT TCATCATGAA AGCGAATATG TACGAAGGCT ACTTCTCTTC CAACCGTCCA GGTGGTGGTG GTAGCGATGA TATCTACCGC TTCATGGATA CGCACTTCGC TGAAAGATTT GAGAGAGATC CGGGTATGCA GCCTTATAAA GAGATCGAAG CGGGTATTAA ACCAGACGTG CCTGCACTCG CTGATAATAC AGCGGTTGTT ACAGACGTTC CGGCGGAAAC AGTTGCAAAA GCCGATGGCC AGAAACAACC AACCGTCATT TCTCCAAGAC AACAGGTAGT TGCACCAATT ACTTTACCAA CAGTAGCAGA TCCTGTTCAG ACCTCGTCTA AAACGACTGA AGAACCGGTT GTGACGAATC CAAGACAGGC GGTAAGTGCA CCAATCGATA TTCCAGGTGC TGCACCTACT TCACATCCTG CTGAACCGGT AGTAGCTAAA AACGATCCTG TAGCAGCACC AGTGAAAGAA GAGCCGGCAA AGGAACCTAA ATCAGCTGCG CCTGTAAGAC GCGGACCAGG TTCAAAAACA CCAGCGCCTG TTAAGAAACC AGGTGTGAAA ACACCAGCGG TAGCCGTAGC TGCACCAGTA GTAACTGCGC CTGTAACAGA AGAACCGGTA GTAGAAAAAA CACCTGAAAA AGCACCTGAG AAAACGCCTG CAAAACCAGT TGAAACGGTA GCAGTCGCAC AACCGGAAGC CAGACAGGAG AAAGAAATGG ACGAAATGGA TGCGGCTATA CAGCATAAGA TGGAAGGCAT GGAGTTCTAC TACGACTATA ACAGTGCGGT ACTGACCACC AAGTCAAGAA ACCTGCTGGA TAGGGTAGCG GTAGTACTTA ACCAATATCC TGACTGGAAA CTCCTGGTTC GTTCCTACAC TGACAGCCGT GGTTCTGACG CATACAACAA GGACCTCTCT GCACTGCGTT GTTATGCAGT AATTGAATAC CTGGTACGTA AGGGTGTACC TTCTACGAGA CTTTACTACG AAAACATCGG TAAAGATCCT GAAGATCCAT GCGGTAAAGG TGTACCTTGT ACGGATGAAC AGTATATGCA CAGCAGACGT ACAATGTTGA AAATCATTCA CAAATAA
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Protein sequence | MLRRCYAILL CTTLTVPVML YGQEQKSVRV RADEAFERQE YAVAASLYGR IINKKKDKTS IDLLQRIALC NREIGQYEDA AFWYEKMVDR PDCPPVTYLQ YGEVLKSVGK YVEAKQQITK FTTGKQDSLR LKNVMMAGCD SAIVWKSGRL DMAMENIKEL SSSGSDYVSG VTRQGLLLVS NGYRKMTMNL LPERNPAIDT RTNQPYYKAY IFKQYSQGVA NTFVEEVVPQ LLALVPYHIG PVCFNAREDT IYVTLNSWQQ DIANRKKRGP VNGERVMMVF WSVKTGDDWR PLEPLREINA PGSSTGHVAL SRDGKTMYFA SNRKGGQGRM DIWFSEKQKN GRWGKPKNCG PIINTPFDEA FPTYNEDNML YFSSKGHPGL GGFDMFRIKG KGAEWTRLQN LRYPFNSGGD DLGFIMKANM YEGYFSSNRP GGGGSDDIYR FMDTHFAERF ERDPGMQPYK EIEAGIKPDV PALADNTAVV TDVPAETVAK ADGQKQPTVI SPRQQVVAPI TLPTVADPVQ TSSKTTEEPV VTNPRQAVSA PIDIPGAAPT SHPAEPVVAK NDPVAAPVKE EPAKEPKSAA PVRRGPGSKT PAPVKKPGVK TPAVAVAAPV VTAPVTEEPV VEKTPEKAPE KTPAKPVETV AVAQPEARQE KEMDEMDAAI QHKMEGMEFY YDYNSAVLTT KSRNLLDRVA VVLNQYPDWK LLVRSYTDSR GSDAYNKDLS ALRCYAVIEY LVRKGVPSTR LYYENIGKDP EDPCGKGVPC TDEQYMHSRR TMLKIIHK
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