Gene Cpin_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2174 
Symbol 
ID8358326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2665290 
End bp2665997 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content43% 
IMG OID644964358 
Producthypothetical protein 
Protein accessionYP_003121867 
Protein GI256421214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGTA GTACACAACA ACTTGCCGGC AGCAAGATAT TGTTTGCAAC AGTATCAGGC 
GACAGGTATA TTCACCCCCT CACCGGTTTT GCCCAATACC TGCAACATGC AGGCTGTGAT
GTAAGATGGT ATGCATCGAA ATGTTACACG CAACTATTCC ATCAACTGAT GATCTACAGT
TATCCATTGA AAAGAGCAAA AGATGTGAAC AGCCGGAATA TAGATGATAT GCTACCGGAG
CGGAAAAACA TCAGTAACGA AACGGCGCGT ATGAATTTTG ATATGTTACA TTACTTCATA
CTGCCTGCAA CGAAATACTA TGAAGATATC CGCGATATAC GGGACATTTT TCCATTTGAT
ATCATGATCA CAGACGGCAT GTTCAGTGCC GGTCCGATTG TACGCAACAA GCTACAGATA
CCAGTGCTTA CTTTTGGTGC GACAGCTGTC AGGGACGAAA TACCGAAAAC GGGTATTGTA
CACAAATGGC GAAGCGTTAT ACAATTGACG CTGGCCACTT TCATGGCAGA TAAAATACTG
TTCAATCAAC CCTTCCGTGC GTATAAGGAT ATATGCAGGC GATACGGTGT TCAGCAAAAG
GGAAATAACT TTTCAGACAG TATTGCGCTT CATGCCGATA AGGTTTTACA GGCAGATGCG
CCGCTTACCG TGAATGCCGG ATATGTTGCA GAATTGCTAA AAATCTAG
 
Protein sequence
MTSSTQQLAG SKILFATVSG DRYIHPLTGF AQYLQHAGCD VRWYASKCYT QLFHQLMIYS 
YPLKRAKDVN SRNIDDMLPE RKNISNETAR MNFDMLHYFI LPATKYYEDI RDIRDIFPFD
IMITDGMFSA GPIVRNKLQI PVLTFGATAV RDEIPKTGIV HKWRSVIQLT LATFMADKIL
FNQPFRAYKD ICRRYGVQQK GNNFSDSIAL HADKVLQADA PLTVNAGYVA ELLKI