| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2146 |
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| Symbol | |
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| ID | 8358298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2628351 |
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| End bp | 2629211 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644964330 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003121839 |
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| Protein GI | 256421186 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00502673 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACATC ACCAGGAAAA TACACAATTG AAATCCAGGA TTCAGATCCA TTCATTTGAA
TCATCAGATA TGATTAATAC GTTTTCTGAC CGGGAGGCGT TTAAACGCGA GAATGTAGAG
ATCCTCTGGT CGAAATACGG CAGCGGCACT GTACAGGCGG ACGGTAAGAT CATGCAGGTG
GAAGAACACC AGATCTATTG TTTCCTGCCA GGTCAGCTTA GAAAGTTTCA GCTGGAAGGT
CCTGTCAATG GCTATTATAT TTCTTTTTCA CCTGATTGCC TTTACCTGGC TTATAACCTG
AAGGACATGA TGTCGTCCTT CGAAGAGTCC ATATTGAATA TGCAGTTGCT TAACTTCAGA
GCAGATGAGG AGATGCAGGA GGAACTGGAA GAAATTGTCA GAAAGATGCA AAGGGAGTGT
GAAGGTGATC TGTGGATGCG TTCTGAGGTT TTATCAGGAC TACTGAACGT GTTTATGATC
TATTTGTCCA GGGAATTAGG TGTTGGTGCA CAAACACAGG TACTGTCCAG AGAGGGAGAT
GTGGCGCGGA AGTTTATGAC GATGCTGAAA CAGCAGTTCT TGCATTGTAA GAAGGTAGCT
GATTATGCAG ATGCCTTGAA TGTAACGCCT AACTATCTGA ATACAGCGGT TAAAAAAGTG
ACGGGTTTTA CTGCCAGTTA TCAGATACAT AAACTGATCA TCCTGGAAGC TAAACGCCGG
ATGTTATATA CGGATAGTAG TCTGAAGGAA ATTGCTTTTG ATCTGGGTTT CGATAATCAG
GCGCATTTTA GTAAGTTCTT CAAAGCTAAA ACAGGCATGA ACTTTACGAC CTTCAAACAT
AGTATGGCCG AAATGGTCTG A
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| Protein sequence | MRHHQENTQL KSRIQIHSFE SSDMINTFSD REAFKRENVE ILWSKYGSGT VQADGKIMQV
EEHQIYCFLP GQLRKFQLEG PVNGYYISFS PDCLYLAYNL KDMMSSFEES ILNMQLLNFR
ADEEMQEELE EIVRKMQREC EGDLWMRSEV LSGLLNVFMI YLSRELGVGA QTQVLSREGD
VARKFMTMLK QQFLHCKKVA DYADALNVTP NYLNTAVKKV TGFTASYQIH KLIILEAKRR
MLYTDSSLKE IAFDLGFDNQ AHFSKFFKAK TGMNFTTFKH SMAEMV
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