Gene Cpin_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2124 
Symbol 
ID8358276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2605480 
End bp2606223 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content43% 
IMG OID644964309 
Producthypothetical protein 
Protein accessionYP_003121818 
Protein GI256421165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAC GTAGTATTTT AATCCCGGTT TTGCTGCTGT TTGTTGCCGT TGCATGTAAC 
AGCACAACTG AAAAGCAGAC ACTTGATTTT GGTGTTTTTA AACTGACGAC GCCTGCCGGT
TGGAAGAAAG TTAAACGGCA GGGTATTGAT ACTTATGTTG GTGGATTAAC GGATGGAGTA
GATACGCTGC ATTTTGGTTA TGGTCACTAT TATGAGGAAA TAGGTCAGTT TACAGATGAA
AAAATGAAGT ATGCAGCGGA TACGGTGAAT GGATTACGGG CGAATATAGG ATTGTCTCAA
GCTCCCGGAC ATCTGGCCGT GATGATGATA GCCGTTAACA GGGAGGATCA GTTTATCATA
GATGGTACAG ATTTAAAACA GCCTGATGTT GTGCTCGACA TCTTCCGCTC GGTTGTTTTT
GAAGAGAGTA ATGTGTCGAA GAATCGTATC ACACCCGTCG ATAGTTTTAT CTTACGCGCT
CCTGTTTCGG CAAAAGGCTT ATTCAGGATA AATTGTGCAT CCTGTCATTC ATTTCACAAG
CAGCTCACAG GGCCGGTATT GACTGAACGG GTTAATGTCA GGAATGACCA ATGGCTATAT
GATTTTTTGC GGGACCGTGC TTCCGTGCGT ACAGATACAG GTCAGGTCCG GTTAAAGAAA
GAATACGGTT TTGAATGTCC TGATTTTTCC ACGATGAGCG AGGAAGAACG CTGGGCATTG
ATTGACTATA TAAAAGTTAA ATAA
 
Protein sequence
MNSRSILIPV LLLFVAVACN STTEKQTLDF GVFKLTTPAG WKKVKRQGID TYVGGLTDGV 
DTLHFGYGHY YEEIGQFTDE KMKYAADTVN GLRANIGLSQ APGHLAVMMI AVNREDQFII
DGTDLKQPDV VLDIFRSVVF EESNVSKNRI TPVDSFILRA PVSAKGLFRI NCASCHSFHK
QLTGPVLTER VNVRNDQWLY DFLRDRASVR TDTGQVRLKK EYGFECPDFS TMSEEERWAL
IDYIKVK