Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2112 |
Symbol | |
ID | 8358264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2589256 |
End bp | 2590386 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964297 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003121806 |
Protein GI | 256421153 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.278161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA TATTCACAGC AGCGTTGCTT TGTATGCCAG GTATGCTGCT TGCGCAGAAG CCCTTTAAAC TGTCGGGGAA GGTTGGAGTA TTGGATAAGC CGGCAAGAGC CTATCTTTTG TATAGTTACA ATAGCAAAAC TACCCTGGAT TCAACAGATA TTTCCGCTGG TGATTTCGCG TTCAGCGGTA AACTGGATTA TCCGGTTACA GCTACTGTTA TTATCAGTCA TGATGGTAAA ACGATGCGTG AAATGAGAGA ACAGGATAAG TTGAATATTT ATCTTGAACC CGGTGACCGT ACGATGCTAC CGGCCGATTC CATCGCCAGA TCGGGTGTTA ATGGTTCTGC TATTAACGAT GCCTATGTTA AGCTGTGTAA TGCACTGGCC CCTGTGGAAA TGGAGCTGAT GAATATCTAT AGGAAATATG CTATCGCTAC GGCGGAAGAA CGCAAATCAG AAAGTTTTAA AAAGGAAATG GAGGCGGCAG AGGAAGCCAA TGATAAAGCT AAAAAGGCAG TACAGCTGGA TTTTATTCAG CGTCATCCGA ATTCAATTGT AAGTCTGCAT ACCATACAGG ATTATGGTGG TGCAGTACCG CAATATGAAG TGGTGCAGCC GTTGTTTGAA GGACTGGCGA AAGAGATCAA AACATCTGTA CCGGGGAAGA AGTATAGTGA ATATCTTGTA AAGATCTCGC GTACTGCCAT TGGCAAAGTG GCGCCGGAAA TAGCTTTGCC GGATACGGCG GGGAATGTGA TTAAACTTTC TTCCCTGAAA GGTAAATATG TGCTGATTGA TTTCTGGGCT TCCTGGTGTG GCCCCTGCAG AGCAGAAAAC CCGGCGGTTG TAGAAGCGTA TAACAAGTAC AAATCTCATG GATTTGAAGT ACTGGGTGTT TCGCTGGATA AAGGACCCTC AAAGAGTGCC TGGATAAAAG CAATTAAAGA TGATGGACTC ACCTGGTTAC AGGTATCTGA TCTGCAATAC TGGAAGAGTC CGACAGCCGG GGAGTATGGT ATACGTGCGA TTCCACAGAA TTTCCTGCTG GATCCGGAAG GAAAGATCAT TGCAAAGAAT CTGAGGGGAG AAGAGCTGGA TAAAAAGTTA AAAGAGACTT TCGCCATGTA A
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Protein sequence | MKRIFTAALL CMPGMLLAQK PFKLSGKVGV LDKPARAYLL YSYNSKTTLD STDISAGDFA FSGKLDYPVT ATVIISHDGK TMREMREQDK LNIYLEPGDR TMLPADSIAR SGVNGSAIND AYVKLCNALA PVEMELMNIY RKYAIATAEE RKSESFKKEM EAAEEANDKA KKAVQLDFIQ RHPNSIVSLH TIQDYGGAVP QYEVVQPLFE GLAKEIKTSV PGKKYSEYLV KISRTAIGKV APEIALPDTA GNVIKLSSLK GKYVLIDFWA SWCGPCRAEN PAVVEAYNKY KSHGFEVLGV SLDKGPSKSA WIKAIKDDGL TWLQVSDLQY WKSPTAGEYG IRAIPQNFLL DPEGKIIAKN LRGEELDKKL KETFAM
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