Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2061 |
Symbol | |
ID | 8358213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2510920 |
End bp | 2511972 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644964247 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003121756 |
Protein GI | 256421103 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAC CTTTACACGA AAAAACTATG GATGCTAACT GGATGCTTCA GTTGATCATT TCAGAAAAAT ACCGTTTTCT GCGGCATATC TTACTGATCA TCTTTTGTAT TGTTGTTTTA TATTACAGTC CGGCGGACTA TGTAGAACCT TTTGAGACCT ATAACCGACT GGTCATTTTT TTTCAGATAA TCCTGATAGC CTACAGTAAC ATGTATTTTT TTGTTCCCGG ATTTTTGTTC AGAAACAAAT ATCTGAGTTA TGGTGTTTTT GTGCTTTCAG GCATGGTCAT TTCGTATTAT GTTCACGAAG TCTTTGCTGA TTCCTTTAAA CGGGATCTAT TGCCTAATGA GGACGACAAC ATTAACTTTT TTACTTTTTC TTTTATGACG ATGGTGCTTA TCATAGCATC GGCAGCAATT AAGTTATTTC AACGGTGGAT ATCTGATGCA CAGCTGATCC ATGACCTGGC ATTGGCTAAT ACCAATAGTG AACTGGAACA GCTCAAGAAT CAGATCAATC CTCATTTCCT TTTTAATATG CTCAACAATG CCAACGTATT AATTGAGGAT GATCCCCAAA AAGCTTCACA GGTATTGGTA AAACTAAGTG ATTTGCTTCG TTATCAGCTT TATGACAGCT CAAGAGATAA AGTTCTGCTA ACTTCAGAGG TCCATTTTTT AGAAGATTTT CTGAACCTGG AGAAAATCAG ACGGGATAAT TTCAGTTTTT TAATATCCAA AGAAGGTGAA TTGAGCGGTG TTCAGGTGCC TCCCTTATTA TTCATATCAT TTGTCGAAAA TGCCGTAAAA CATAATAACG ACTCAGCGAA GTTATCCTAT CTGAATTTAT ATTTTGATGT GGGCCACGAT GAGCTTTTTT TTAAATGCGT AAATTCGAAA CCCGCGGTGA AAGCTGTTAA TAAGTCCGGA GGATTAGGTC TGGTAAATAT CAAAAGAAGA TTAGAATTAC TATTCCCGTC CTCGCACACT TTGACAATAG AAGACAATCA GGAAATGTAC TGCGTTACCT TACTTTTAAA TTTAAAAAAA TGA
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Protein sequence | MGKPLHEKTM DANWMLQLII SEKYRFLRHI LLIIFCIVVL YYSPADYVEP FETYNRLVIF FQIILIAYSN MYFFVPGFLF RNKYLSYGVF VLSGMVISYY VHEVFADSFK RDLLPNEDDN INFFTFSFMT MVLIIASAAI KLFQRWISDA QLIHDLALAN TNSELEQLKN QINPHFLFNM LNNANVLIED DPQKASQVLV KLSDLLRYQL YDSSRDKVLL TSEVHFLEDF LNLEKIRRDN FSFLISKEGE LSGVQVPPLL FISFVENAVK HNNDSAKLSY LNLYFDVGHD ELFFKCVNSK PAVKAVNKSG GLGLVNIKRR LELLFPSSHT LTIEDNQEMY CVTLLLNLKK
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