| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2039 |
|---|
| Symbol | |
|---|
| ID | 8358190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2482299 |
|---|
| End bp | 2483627 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644964226 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_003121735 |
|---|
| Protein GI | 256421082 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.970546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.403341 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAG TAGCAAACTC TAACATCGAC TTTAACCTTG CCTACAAGGT AAAAGATATG
TCTCTGGCTG AATGGGGACG TAAGGAAATT GAACTTGCAG AAGCCGAGAT GCCCGGTCTG
ATGTCTTTAA GAGAAGAATA CGGTAACACC AAGCCTTTAC AGGGTGCGCG TATTGCCGGT
TGTCTGCACA TGACTATCCA GACAGCTGTA CTGATCGAAA CCCTGGTACA CCTGGGTGCT
GAAGTACGCT GGAGCTCCTG CAATATCTTC TCTACACAGG ATCATGCTGC TGCTGCTGTT
GCTGCTGCAG GTGTACCTGT ATTTGCATGG AAAGGTCTGA ACGAACAGGA TTTTGACTGG
TGTATTGAAC AGACCCTGTT CTTCGGTAGC GCTGACCGTC CGTTGAACAT GATCCTGGAC
GATGGTGGTG ACCTGACCAA CATGGTATTC GATAAATACA CTGAGCTGAT CCAGCACATA
AAAGGACTAA GTGAAGAAAC CACTACCGGT GTTCACCGTC TGTACGAGCG TATGGAAAAA
GGCACCCTGC CTGTTCCTGC GATCAACATC AACGACTCTG TTACCAAATC TAAATTTGAT
AACAAATACG GTTGCCGCGA ATCCTGCGTA GATGCGATCC GTCGTGCTAC TGACGTGATG
ATTGCCGGTA AAGTTGCCGT AGTTGCCGGT TTCGGTGACG TAGGTAAAGG TTCTGCTGAA
TCCCTGAGAG GTGCAGGCGC CCGTGTAATC GTTACTGAAA TTGACCCGAT CTGTGCACTG
CAGGCCGCAA TGGAAGGTTA CGAAGTGAAA AAGATGAACG ACGCTGTTAA AGAAGCAGAT
ATCATCGTTA CCACTACCGG TTGCCGCGAT ATCATCACCG GAGAGCACTT CAAACTGATG
AAAGATAAAT GTATCGTATC TAATATCGGT CACTTCGATA TCGAGATCGA CGTTGCATGG
TTGAACAAAA ACTACGGTAA TACCAAAGTT GAAATCAAAC CACAGGTAGA TAAATACACC
ATCGATGGTA AAGATATCAT CCTGCTGGCT GAAGGTCGCC TGGTAAACCT GGGTTGTGCT
ACCGGTCACC CGTCTTTCGT AATGAGTAAC TCCTTCACCA ACCAGACACT GGCTCAGCTG
GAACTGTGGC TGAACGCAAA CAACTACGAA AACAAAGTAT ACGTTCTGCC TAAGCACCTG
GATGAAAAAG TTGCCCGTCT GCACCTGAAG AAAATCGGTG TGGAACTGGA CATCCTGACA
CCAACACAGT CCGCTTACCT GAACATCCCT GCTGAAGGTC CGTTCAAACC GGATTACTAC
AGATACTAA
|
|---|
| Protein sequence | MSTVANSNID FNLAYKVKDM SLAEWGRKEI ELAEAEMPGL MSLREEYGNT KPLQGARIAG
CLHMTIQTAV LIETLVHLGA EVRWSSCNIF STQDHAAAAV AAAGVPVFAW KGLNEQDFDW
CIEQTLFFGS ADRPLNMILD DGGDLTNMVF DKYTELIQHI KGLSEETTTG VHRLYERMEK
GTLPVPAINI NDSVTKSKFD NKYGCRESCV DAIRRATDVM IAGKVAVVAG FGDVGKGSAE
SLRGAGARVI VTEIDPICAL QAAMEGYEVK KMNDAVKEAD IIVTTTGCRD IITGEHFKLM
KDKCIVSNIG HFDIEIDVAW LNKNYGNTKV EIKPQVDKYT IDGKDIILLA EGRLVNLGCA
TGHPSFVMSN SFTNQTLAQL ELWLNANNYE NKVYVLPKHL DEKVARLHLK KIGVELDILT
PTQSAYLNIP AEGPFKPDYY RY
|
|---|
| |