| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1965 |
|---|
| Symbol | |
|---|
| ID | 8358116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2397792 |
|---|
| End bp | 2398604 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644964153 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003121662 |
|---|
| Protein GI | 256421009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000626614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.448154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTG GTTTGTATGC CCAGACTACA GATACAGACG CATCTTCCAA AAAAGAACAG
CGGGAGGAAC GGAAGCTGAA GCGGATTTCC TTGTTTAAAC AGCTGGAAGA GGGTGAGAAT
CTGTATCAAA GAGAATTTTC CCTGGGTGGC CGTATCAATA CGGATGGCTG GGCTGGTTTT
TTTGAACTGG GTTGGAGAAA GAGCAGGCAG AAGGTGACTT ATTTCCAGTT TGAGTTTGCT
GAGAAGAAGA ATCCGAAGGA AGATAAAAAG CCAGGTGCTT TAAAAGATAT CGATCAATTT
GGCTTTATTT ATTCAGAGAA GCCATATATA TATGGTAAGC AGAATAACTT TTACCAGGCC
AAACTGGGTG TTGGTCAGCA AAGACTGATC GGCGGTAAGG GCAACAAAAA CGGGGTACTG
GTAAATGCGA TCTATTATGG CGGACTTTCC GTTGGTCTGA AGAAGCCTTA TTACCTGAAT
GTGGTAGATC CGAATACATC AAGAGGTGTA CAGGTGAAAT ATGGTCAGGA TCCATTATAT
GACCAGGCTT TCCTGGACAG GTCGTCTATT ATTGGCGGCG CTGGTTTCGG AAAGGGCTGG
GGCGAGGTGA GTATTGTACC TGGTATACAT GCCAAAACTG GTCTGCGCTT TGACTGGGCT
CGTTTTAACG AGGTGGTCAG CGCCCTGGAA GTGGGTGTGA ATGCGGAGTA TTATACCAAG
GATGTCGATA TTATGATCGA CCAGGATCCT AAGAAATTTT TCTTTAATGC ATACATTGCG
TTACAGTTTG GAAAGCGTTG GGACAAGAAA TAG
|
|---|
| Protein sequence | MAGGLYAQTT DTDASSKKEQ REERKLKRIS LFKQLEEGEN LYQREFSLGG RINTDGWAGF
FELGWRKSRQ KVTYFQFEFA EKKNPKEDKK PGALKDIDQF GFIYSEKPYI YGKQNNFYQA
KLGVGQQRLI GGKGNKNGVL VNAIYYGGLS VGLKKPYYLN VVDPNTSRGV QVKYGQDPLY
DQAFLDRSSI IGGAGFGKGW GEVSIVPGIH AKTGLRFDWA RFNEVVSALE VGVNAEYYTK
DVDIMIDQDP KKFFFNAYIA LQFGKRWDKK
|
|---|
| |