Gene Cpin_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1881 
Symbol 
ID8358032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2288743 
End bp2288934 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content44% 
IMG OID644964069 
Producthypothetical protein 
Protein accessionYP_003121578 
Protein GI256420925 
COG category[S] Function unknown 
COG ID[COG4877] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATA AGAAAACATT TGTATTAAGG ATTGATACCC AAACATATGA AGCAATTGAG 
AAATGGGCTG CGGATGAGTT CAGAAGTATC AATGGTCAGC TGGAGTGGAT CATACACCGT
GCACTGAAAG AAGCAGGACG TACGGTTAAA ACAGGGCCTG AAAAGCCGCC CAAAAAGAAT
GACCCGGCAT AA
 
Protein sequence
MADKKTFVLR IDTQTYEAIE KWAADEFRSI NGQLEWIIHR ALKEAGRTVK TGPEKPPKKN 
DPA