Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1737 |
Symbol | |
ID | 8357887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2093783 |
End bp | 2095084 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963924 |
Product | hypothetical protein |
Protein accession | YP_003121434 |
Protein GI | 256420781 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000291143 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAC GCTTACTCCT GATATGTTTT ACCTTTTTCG TACTGGCAGC CTGCCAGAAA TCGGATGAAG ACGTATTCAA CGCTCCTCCC GATACCCGCC TGAACGATAC CCTGAAAAAG TATAACGATA TGCTGGTGGC AGCGCCATAC GGCTGGAAAG GGCTGGTATA TCCTTCCGGT CTGGAGCATG GAATATTCTC CTTTTACTTT CAGTTCAATG ATTCCAACAG GGTGAAGATG TATGCGGATT TTGATTCGGC ATCTTCCGTG ACCATGGCAG AAAGCAGCTA TCGCCTGAAG GCATTGCAGC AACCATGTCT CCTGTTTGAT ACCTACTCCT ATATACACCT GCTGAGCGAT CCTGACGGAT CCGTAAATGG GGGTGTGTAT GGCGAGGGAC TGTATTCTGA CTTTGAATTT TCTATCGAAG GAATGAGCGG AGACTCCATT GTACTCAAAG GAAGATATCA TGGCAGCAGA GCGGTACTGG TAAAAGCAAC AGAAGCAGAG AAGAATGCCT ACAGCGCTGA AAAGAGTAAT CGCCTGATCG ATAAAATAGG TAGCTACCTC ACTTACTTCA AACGCCTCAC CATTAACAGT AAAGGATATG ATGTGTCTTT TGATGTTGCC AGCAGAACCA TTACAATCAG TTGGGTAGAT GAAGGGGGCA ATAACCATAC AGCAAGCACT GGTTTCTACT ATACACCTAC CGGTGTAGCA TTCTCTCCTG CAATCAGTAC AGGTAATGAA ACGCTGACCG GCTTTGACAA TGTTACCTGG AATGCATCCA CGACTACACT GGGTTTTACC GCCAATGGTA ATACCGGTAC AATCAAAGAA ACTGCTAAAC CGCTGGTAAT AGATAAAGAG GCTGCTAAGA GCTGGTGGCA ACAGCAGGTA GACGCAGGTA GCTACTGGGT AACCGTAGAT GGATTTCACG TAGACGGTAT TGACGATGCC TATGGCATTC AGCAATTGCC TAACTATTCC TTTGTTGTAT TCTATCCGAA ATTCGGCACA AGCGATAATA CAGTGTATGA CCTCTTAGGT TTTGTAACCC GCACTGAGGC CGGACAATAC ATCGAATACG GGCCTGCATT CAGCGCGCCG ACTTTCAAGA CAGACGGCCG CATCATATTC CCGTACCTGG GCATACTCGG AGAACTGCCG GATGGAGAGA CTGCTGTCTC CAACACCATT ACGAAGATCA CAGACTCCAA CGGATTCTAC CTGGTAAAAA CGAACAGCGG TTACGATATG GTAAGCGCTA AAGACGGAAA ATCCTGGATA TCCTGGTTTT AA
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Protein sequence | MYKRLLLICF TFFVLAACQK SDEDVFNAPP DTRLNDTLKK YNDMLVAAPY GWKGLVYPSG LEHGIFSFYF QFNDSNRVKM YADFDSASSV TMAESSYRLK ALQQPCLLFD TYSYIHLLSD PDGSVNGGVY GEGLYSDFEF SIEGMSGDSI VLKGRYHGSR AVLVKATEAE KNAYSAEKSN RLIDKIGSYL TYFKRLTINS KGYDVSFDVA SRTITISWVD EGGNNHTAST GFYYTPTGVA FSPAISTGNE TLTGFDNVTW NASTTTLGFT ANGNTGTIKE TAKPLVIDKE AAKSWWQQQV DAGSYWVTVD GFHVDGIDDA YGIQQLPNYS FVVFYPKFGT SDNTVYDLLG FVTRTEAGQY IEYGPAFSAP TFKTDGRIIF PYLGILGELP DGETAVSNTI TKITDSNGFY LVKTNSGYDM VSAKDGKSWI SWF
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