Gene Cpin_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1624 
Symbol 
ID8357766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1969241 
End bp1969498 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content41% 
IMG OID644963804 
Productribosomal protein S17 
Protein accessionYP_003121321 
Protein GI256420668 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA GAAAATTAAG AAAAACCAGA ACTGGCGTGG TATCCAGCAA TAAGATGGAT 
AAAACAATCA CCGTTAGCGT TGAGCGTAAG GTGAAACACC CAATCTATGG TAAATTCGTT
AAGAAAACTA CCAAGTTCAT GGCGCACGAC GAACAAAACG AGTGCAGCAT CGGCGATACC
GTAAGAATCA TGGAAGTTCG CCCTCTGAGC AAAAACAAAT GCTGGAGACT GGTAGAAGTT
ATCGAAAAGG TAAAATAA
 
Protein sequence
MIERKLRKTR TGVVSSNKMD KTITVSVERK VKHPIYGKFV KKTTKFMAHD EQNECSIGDT 
VRIMEVRPLS KNKCWRLVEV IEKVK