| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1569 |
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| Symbol | |
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| ID | 8357711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1911087 |
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| End bp | 1912613 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963749 |
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| Product | spermidine synthase |
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| Protein accession | YP_003121266 |
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| Protein GI | 256420613 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAA AAGAAAACGG CGCACAGTGG CTGTTACTGA CGGCAGTATT TGTTATTGCC
ACCTGTGGAT TAATCTATGA ACTGGTAGCC GGCACCCTGG CTTCTTACCT GCTGGGGGAC
AGTATTACAC AGTTCAGTAC TATTATTGGC GTGTACCTGT TTTCCATGGG AATAGGTTCC
TTCCTGTCTA AATACTTCAG CAAAAACCTG CTGGCCTGGT TCATCAGGAT AGAGCTGCTG
GTAGGTCTGG TAGGAGGGTT CAGTTCCGCC CTGTTATTTA TTATGTTCCC GCTGGCAGCG
TCTTTCCGCC TGATACTGTA TGCCATCGTA CTTATCACCG GTATACTGGT CGGACTGGAA
ATACCGCTGC TGATGCGTAT CCTGGAAAAT AAGGTGGAAT TTAAAGAGCT GGTGAGCCGG
GTATTTACAT TTGACTATAT CGGCGCGTTG CTGGCATCCC TGATCTTTCC GTTATTACTG
GTACCACACC TCGGACTGAT CAGAACCTCT CTGTTTTTCG GCATTCTGAA TGTCGGCGTG
GGTTGGTATC TGGCGTATAA GTTCTCAGGA GAAGTACGAC AGGCAGGTCT CTTAAAGGCA
AGTGCCATCA TCCTGTTATT GTCTCAGCTG GTATGTTTTG TCTTTTCAGA AAAGATCATG
ACTTACAGTG AAGCTATGAC CTATGACGAC AATGTGGTGT ACTCGACCTC TACCCCTTAT
CAGCGTATCG TGATCACTAA AAACAAGCAT GAACTGCGGC TTTTCCTGAA TGGGAATCTT
CAGTTCAGCA CTGCTGACGA ATACCGTTAT CATGAAGCCC TGGTACATCC TACGTTCTCG
TCTCTCAGTA ACCCGGAGCA GGTGCTGGTA TTGGGAGGCG GAGACGGACT GGCAGTAAGA
GAGATTCTAA AATATCCCGC TGTAAAGCAG GTGACGCTGG TTGATCTCGA TCCTGCCATG
ACAAAGCTGT TCTCCAAACA GCGTATGCTC ACTATGCTCA ATGATTCTTC CCTGTTGAAT
CCGAAGGTAC GGGTACACAA TGCAGATGCA TTTACCTGGC TCCGGAATAA CAGGACGAAA
TTTGATGCGA TCGTTGTAGA CTTTCCGGAT CCCTCTAACT TTTCTATCGG AAAGTTGTAC
AGCACTACTT TTTATCAATT GCTGAAACAC GCATTACGCC CTGACGGTAT TGCCGTTATT
CAGAGCACTT CTCCATATGT TGCCCCTAAA AGTTTCTGGT GTGTAGACAC GACATTAAGA
GCTGTCGGTC TGCATACAAT TGCCTATCAT AACTATGTTC CCTCCTTTGG TGAATGGGGA
TATATTATGG CTACTCCGCA GGAGCCACAT CAATGGTTCA GCCATATACC GGCTCCGCTG
AAGTTTCTTA ATCCGACTAC CTTACAGCAG ATGCTTACCT TTCCTGAAGA CATGAAAGCG
CATCAGTTGC TCGACATCAA TAAACTCAAT AACCAGGCAC TGGTAAAATA TTTCGAAGAA
GAGTGGAGTA AATATCTTGA ACGTTAA
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| Protein sequence | MSKKENGAQW LLLTAVFVIA TCGLIYELVA GTLASYLLGD SITQFSTIIG VYLFSMGIGS
FLSKYFSKNL LAWFIRIELL VGLVGGFSSA LLFIMFPLAA SFRLILYAIV LITGILVGLE
IPLLMRILEN KVEFKELVSR VFTFDYIGAL LASLIFPLLL VPHLGLIRTS LFFGILNVGV
GWYLAYKFSG EVRQAGLLKA SAIILLLSQL VCFVFSEKIM TYSEAMTYDD NVVYSTSTPY
QRIVITKNKH ELRLFLNGNL QFSTADEYRY HEALVHPTFS SLSNPEQVLV LGGGDGLAVR
EILKYPAVKQ VTLVDLDPAM TKLFSKQRML TMLNDSSLLN PKVRVHNADA FTWLRNNRTK
FDAIVVDFPD PSNFSIGKLY STTFYQLLKH ALRPDGIAVI QSTSPYVAPK SFWCVDTTLR
AVGLHTIAYH NYVPSFGEWG YIMATPQEPH QWFSHIPAPL KFLNPTTLQQ MLTFPEDMKA
HQLLDINKLN NQALVKYFEE EWSKYLER
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