Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1504 |
Symbol | |
ID | 8357645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1847411 |
End bp | 1850428 |
Gene Length | 3018 bp |
Protein Length | 1005 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644963684 |
Product | amidohydrolase |
Protein accession | YP_003121202 |
Protein GI | 256420549 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000736153 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAATT TTTTTTCGCC GCGTAAGCGG TTGTCCCACC TGTGTCTGTT GCTGAGCGGT CTGCTGGCTG GCTCGTATGC TTCAGCGCAG GAAACTTTTC CGGTGAACGG CATCGCCGAT CCCAGAGAAG GGTGTTATGC TTTTGTAAAA GCGACGATTG TAAAAAGCGC CGGTAATGTA TTGAACAATG CCAGCCTCGT AATCCGTAAC GGACGTATCG TCAGTGTTGG CAATGGTCCT GTTCCTAAAG ACGCGGTAGT GATTGATTGC GAGGGTAAAT ATATCTATCC TTCTTTCGTA GATGCTTACA GCGATTATGG TACGCAGCCT GCAAAGAAAG CCGGCGGCGG ATACAGAGGT GATCCGCAGT TCCTTTCTGC CACTAAAGGT GCATTCGGCT GGAACCAGGC AGTGAAGAGT GAAATAAATG CGGCTTCCGT ATTCCAGGTA GATGGTACTG CTGCGGAGTC ATTGAGAAAT GCAGGTTTTG GTACCGTATT GTCTCATCAG CAGGATGGTA TTGCCCGTGG TACGGGCGTA CTGGTAACGC TGGCGGATGA CCGCGAAAAT AAAGTCCTGA TCAAAGAAAA AGCCAGTGCG CAATTCTCAT TCGATAAAGG TAGTTCTACC CAGAATTATC CCAGTTCTTT AATGGGCAGC ATCGCCGTAC TGCGTCAGAC ATTCCTGGAC GCCCAATGGT ATCAGTCACA TCCTGCTAAA GAAGGGACAA ACCTGACTTT ACAGGCATGG AACGATAGCC GCGCTTTACC ACAGATCTTC GACGTACAGG ATAAATGGGA TGCCCTGCGT GCAGATAAAG TAGGCGACGA ATTCGGAGTA CAATATATCA TCAAAGCCAG TGGAAACGAA TACCAGCGTA TACCGGAAAT GGTAGCTACC AAAGCTTCCT TTATCCTGCC GCTGAACTTC CCGCAGCCTA TTGACGTAGA AGATCCGAAC GATGCCCGCT TCGTGGCCCT CAGCGATATG AAACACTGGG AACTGGCGCC GACAGAAGCT GCTGCTTTTG AGAAAGCCAA CATCCCTTTC TGCCTCACCG CTACCGGTCT GAAAGACCTG AAACAATTCC TGGGCGCTGT CAGAAAATCG ATTGAGTACG GCCTCAGTGA ACAAAAAGCC CTGGATGCGC TGACCCTCTC TGCAGCACGT ATCATTAAAG CCGATGATCT CGTAGGCTCC CTGGAGCCGG GTAAACTAGC CAACTTCCTG GTTACTTCCG GTACCATCTT CAATGAAAAT ACCGTACTGT TCCAGAACTG GGTACAGGGT AAAAAATATA TCATCAAAGA CGAAGGCTGG AAAGACGTGC GCGGCACTTA TACACTGACC CTGACGCCGG GTAATACGAA ATATACCCTG CTGCTGAAAG GTACTGCCGC TACACCCACC TTGTCCCTCC TGCAACAGGA TACACTGACT GGCTCGATCA CGATCAATGA TAAGCTGATC AAAATCGCCT TCCCTTTGAA AAAAGGTGGT GCACAACTGC GTCTGAGTGG TGTAGCTGGT ACCAGCGAAT GGAGTGGTAC CGGTCTGGAC ACAGCCGGCA AATGGGTAAA ATGGAATGCC TCCTTCAGTG CCGCTTACAC CAGACAGGAT ACTGCAAAAT CAAAATCAGC GCCACAGCTG GGTAATATGT ACTATCCGTT CAATGGATAT GGCTGGGAAG CCCTGCCTAA ACAACAGGAT ATCCTGATCA AAAATGCGAC TGTCTGGACC AACGAAAAAG AAGGTAAACT CGAAAACACA GACGTGCTGG TACGCAACGG TAAGATCGCT CAGATCGGTA AAAACCTGCC TGCCGGTAAT GCACGTTTAA TAGACGGTAC AGGCAAACAC CTGACGCCGG GTATTATCGA CGAACACTCT CATATCGCTA TTTCCAAAGG CGTGAATGAA GGAACGCAGT CCGTTACTTC AGAAGTGCGT ATCGCGGACG TTGTGAACCC GGATGATGTG AATATCTACA GACAACTGAG TGGTGGGGTA ACCGCTTCCC ATCTGTTGCA TGGTTCTGCC AATACGATCG GCGGACAAAG CCAGCTGATA AAACTGCGTT GGGGTGCTGA TGCGGAAGAA CTCAAATTCG CAGGATCAGA TCCTTTTATC AAATTCGCAT TGGGCGAAAA CGTCAAACAA TCCAACTGGG GCGAACGCCA GCGCGAGCGT TTCCCACAGA CGCGAATGGG GGTTGAACAG GTACTCACAG ATGCATTCAC ACGTGCGCGT GATTACGAAA AAGAAGGCGC CGGCAAACGT CGCGACCTGG AACTGGATGC ATTAGTAGAA ATCCTGAACA GCAAACGTTT CATTACCTGT CACTCTTATG TACAGAGCGA AATCAATATG CTCATGCATG TGGCAGATAC CTTCCATTTC AAAATAAACA CCTTTACACA CATCCTGGAA GGCTATAAGG TAGCCGATAA AATGAAGCAA CACGGTGCAG GTGCAGGTAC CTTCGCTGAC TGGTGGGCTT ACAAGATGGA AGTACAGGAC GCCATCCCTT ACAATGCCAC CATCATGCAA CGCGTAGGGG TGAATGTAGC GATCAACTCT GATGATGCGG AAATGGCACG CAGACTGAAC CAGGAAGCCG CCAAGAGCAT CAAATACGGC GATATGACCG AAGAGGAAGC CCTGAAACTG GTGACCATCA ACCCGGCAAA ACTGTTGCAC GTAGCTGAGC GTACCGGTAG TATCAAAACC GGTAAGGATG CCGACCTGGT ACTCTGGAAC GACAATCCGC TGAGCATTTA TGCAAAGGCG GAAAAGACAC TGGTAGACGG TATCGTATAT TTCGACCGTG AGAAAGACCT GGAACTGCGT CAGCGTATCA GTGCTGAACG TAACCGCCTG GTGCTGAAAA TGCTGAGTGA GAAGAAAAAA GGTACACCTA CACAGAAAGC AGCTGCTTCC AGGGAGGAAA TGTATCACTG TGAAGATCTG CAGGCTGGTC ACCAGCAACG TCTGACAGAT GGAAATAATG AATTGTAA
|
Protein sequence | MSNFFSPRKR LSHLCLLLSG LLAGSYASAQ ETFPVNGIAD PREGCYAFVK ATIVKSAGNV LNNASLVIRN GRIVSVGNGP VPKDAVVIDC EGKYIYPSFV DAYSDYGTQP AKKAGGGYRG DPQFLSATKG AFGWNQAVKS EINAASVFQV DGTAAESLRN AGFGTVLSHQ QDGIARGTGV LVTLADDREN KVLIKEKASA QFSFDKGSST QNYPSSLMGS IAVLRQTFLD AQWYQSHPAK EGTNLTLQAW NDSRALPQIF DVQDKWDALR ADKVGDEFGV QYIIKASGNE YQRIPEMVAT KASFILPLNF PQPIDVEDPN DARFVALSDM KHWELAPTEA AAFEKANIPF CLTATGLKDL KQFLGAVRKS IEYGLSEQKA LDALTLSAAR IIKADDLVGS LEPGKLANFL VTSGTIFNEN TVLFQNWVQG KKYIIKDEGW KDVRGTYTLT LTPGNTKYTL LLKGTAATPT LSLLQQDTLT GSITINDKLI KIAFPLKKGG AQLRLSGVAG TSEWSGTGLD TAGKWVKWNA SFSAAYTRQD TAKSKSAPQL GNMYYPFNGY GWEALPKQQD ILIKNATVWT NEKEGKLENT DVLVRNGKIA QIGKNLPAGN ARLIDGTGKH LTPGIIDEHS HIAISKGVNE GTQSVTSEVR IADVVNPDDV NIYRQLSGGV TASHLLHGSA NTIGGQSQLI KLRWGADAEE LKFAGSDPFI KFALGENVKQ SNWGERQRER FPQTRMGVEQ VLTDAFTRAR DYEKEGAGKR RDLELDALVE ILNSKRFITC HSYVQSEINM LMHVADTFHF KINTFTHILE GYKVADKMKQ HGAGAGTFAD WWAYKMEVQD AIPYNATIMQ RVGVNVAINS DDAEMARRLN QEAAKSIKYG DMTEEEALKL VTINPAKLLH VAERTGSIKT GKDADLVLWN DNPLSIYAKA EKTLVDGIVY FDREKDLELR QRISAERNRL VLKMLSEKKK GTPTQKAAAS REEMYHCEDL QAGHQQRLTD GNNEL
|
| |