| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1460 |
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| Symbol | |
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| ID | 8357601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1788040 |
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| End bp | 1791237 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963640 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121158 |
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| Protein GI | 256420505 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAC AATTACACAG AACAGCCGTG ATACTGTTAT TGGTGTTACT GGGTCTGCAA
GGGGCTCAGG CGCAGGATAA CAAGGTATCC GGTGTGGTAA CTGCCCGCTC CGATGCACAA
CGCATTCCGG GTGTTATCAT TACTGTAAAG GGGAAAAACC GTGGGACAAA TACAGACGCA
GATGGTAAAT ATTCCATCGT TGCCAATCCG AATGATACAC TTCACTTTTC CTTTATAGGC
TATGGCGCCG TTGACCAGGT AGTAGGTACC AATAAAGTAC TGAACGTAGG GCTGGAAAGC
ACCGAAAGTA AACTGAATGA AGTTGTGGTA ACTGCATTAG GTATTTCCAG AGAAAAACGT
TCCCTGGGCT ATGCCGTACA GGAACTGAAA TCAAAAGATA TTGCCGACGC AAAAGAAACC
AACCTGGTAA ACGCACTGGC AGGTAAGATC GCCGGTGTAA CGGTGACCAA CAGCCAGGGT
AATATGGGTT CTTCCCGTAT CATTATCCGT GGTGAGACTT CCATCGCCGG TAACAACCAG
CCGCTCTTCG TAGTGGATGG CGTACCGGTA GATAACAGCC AGCTGGGTAT CGGTACCGGT
CGTGACTTCG CAAACGCGAT CTCTGACCTG AATCCGGATG ATATCGAGTC ACTGAACGTA
CTGAAAGGTC CTAACGCTGC GGCCCTGTAT GGTTCACGTG CGGCGGCAGG TGTACTGGTT
ATCAAAACCA AAACCGGTAA AAGCGCCAAA GGACTGGGTG TTACCCTGAA TTCCAGCGCG
ACTTTCGAAA GTCTGCTGGT ACTGCCTAAA TTCCAGGACG TCTACGGACA GGGTTCCGGT
GGACAGTTCT CTTATGTAGA TGGTAAAGGC GGTGGACTGA ACGATGGTGT GGATGAAAGC
TGGGGGCCTA AAATGGACGG TCGTCTGATA CCACAGTTCT TCTCCAACGG ACAGCCTGCA
CCTTTCGTAG CGCATCCTGA CAACGTAAAA GATTTCTATG AAACAGGATA TACACTGAAT
AATGGTGTTT CTGTAGCAGG CAACAGCGAG AAAATCGACT ATCGTTTCTC ATATAATAAT
ACCAAACAGG AAGGTATCCT GCCTAATACC GGTATTTCCC GTAACTCATT CGCTTTAAAC
AGTACTTACC GTATTGCCCC TAAGCTGACA CTGAGCACTT TCGCTAACTA TACAAGAGCA
GGTGCTGATA ACCTGCCAGG TGTGGATGGC CGTCGTGGTA ACAGTGTGAC CTTACAGTTC
ATCTGGTTTG GCCGTCAGGT AGATACCCGT TTGCTGCGTA ATTATAAAGC AGCCGATGGT
ACTGACTACA ACTGGAACCA CAGCTACTAC AGCAACCCAT ACTGGATCCA GAATGAGAAT
ACCGTTGGTC AGGGACGTAA CCGTTTCTTC GGAAATGCAC GCCTCTCTTA TGAGATCACC
AACTGGCTCT CTGCTAACCT CCGCGTAGGT ACTGACAGCT ATAATGACAA GCGTAAATAC
AAAGTAGCAT TCTATACAAA TGGTACTCCA TTCGGTTCCT ATACTGAAGA CAACTACGTG
GTACAGGAAA CCAACATCGA GTTTACCCTG AATGCGAAAA AGAAAATAAA CAGCGACTTC
ACTATCGACG GACTGGTAGG TGTGAACGAG CGTACCAACC AGTTTGAACA GAACTATCAG
CAGGCGCCTA AACTGGCCGT AAGAGATGTG TACACCCTGA ACAACTCCAG GGACCCACTG
ATCTCTACCA GCTATTTTTC AAAACTGAGA GTATATAGTG CCTTCGCATC AGCTCAGCTG
AGCTTCAGAG ACTGGGCTTT CTTAAACGTA ACTGCACGTA ACGACCGTTC TTCTACACTG
CCTTCAGAAA ACAACTCTTA TTTCTATCCT TCCGTGAACG CAGCAGTTGT ACTGAGCGAT
GCATTGGGTA TTAAGAGCAA TGTGTTAACC AGTCTGAAAG TAAGAGGTGG ATGGGCTCAG
GTAGGTAAAG ATGCAGATCC TTACCAGCTG GTGAATACTT ATCCTTTCAG TCAGCCGTTC
GGTGCTTATC CGCTGCTGAC CGTGAATGAT AAATACCTGA AAAAAGACCT GAAACCAGAG
ATCACCAAAG CGAGTGAGTT TGGGGTGGAA GCAAGTTTCC TGAATGATCG TATCCACACG
GATGTGACCT ATTATACTTC CAGCAGTTAC AACCAGATCC TGTTGGCTGA CGTAAGTGCG
ACTACCGGTT ACCTGAAAAA ACTGCTGAAC GCAGGTAAGA TCAATAACCA TGGTGTGGAA
GTGACCTTAG GTGGTACACC GATCACTACG CCTTCCGGTT TCCTCTGGAA TATCAACTTC
AACTATGCGA AGAACATCAG TAAAGTAATC GAGCTGGATC AGGAAGGATA CCTGAACGAC
TACGTACTGG GTAGCTCTGG CAACATCCAG GTACTGGCCA GCAAAGGCAA ACGTTATGGC
GCCCTGTATG GTAAAGCATA TGCACGCGAT GCACAGGGTC GTATCCTGGT GAATGCAAAC
GGTACACCGC AGATCGCAAA CGATAAAAAA GTACTGGGTT ACTATACACC GAAATGGACA
GGGAGTGTAA ACAACGACTT CTCCTTTAAA GGTTTCACAC TGGGCTTCCT GATCGATACA
AGACAGGGCG GTTCCATCTG GTCAGGTACC AACTACACAG GTATCTATAC CGGTGTACTG
GCAGCGAGTC TCCCTGGTCG TGATGCAGAA CATGGTGGTC TTCCTTACTA CTATGCAGGC
AACAATACCA ACGGTACCGC AGTTAAACTG GCTGACCACA ATGCAGCAGC ACCAAACGGA
GAAACTGTTT ACCATGATGG TATCGTTTTC GATGGTGTAA CCGCAGACGG TAAACAGAAT
GAAGCGATCC TGCCTGCACA GCGTTATTAT AAATCAGTAT ATAGTTCTTC CCTGAACGAA
AGCAGCGTAT ACAGCGCATC TTTCATCAAA CTGCGTGAAG TGAGACTGGG TTATGCACTG
CCACAGGAGC TGATTAAGAA ATGGGGATTA CAGGCGGTTA ACCTGACGGT GACTGCGCGT
AACCTCTGGT ACATCGACAA GAAGGTACCT AACATCGATC CGGAAACAGC GTTCAACACA
GGTAACGGAC AGGGTCTTGA AACATTGCAG ATCCCAACTA CCCGCAGCCT GGGTCTTAAC
CTGAGGGTAT CCTTTTAA
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| Protein sequence | MIKQLHRTAV ILLLVLLGLQ GAQAQDNKVS GVVTARSDAQ RIPGVIITVK GKNRGTNTDA
DGKYSIVANP NDTLHFSFIG YGAVDQVVGT NKVLNVGLES TESKLNEVVV TALGISREKR
SLGYAVQELK SKDIADAKET NLVNALAGKI AGVTVTNSQG NMGSSRIIIR GETSIAGNNQ
PLFVVDGVPV DNSQLGIGTG RDFANAISDL NPDDIESLNV LKGPNAAALY GSRAAAGVLV
IKTKTGKSAK GLGVTLNSSA TFESLLVLPK FQDVYGQGSG GQFSYVDGKG GGLNDGVDES
WGPKMDGRLI PQFFSNGQPA PFVAHPDNVK DFYETGYTLN NGVSVAGNSE KIDYRFSYNN
TKQEGILPNT GISRNSFALN STYRIAPKLT LSTFANYTRA GADNLPGVDG RRGNSVTLQF
IWFGRQVDTR LLRNYKAADG TDYNWNHSYY SNPYWIQNEN TVGQGRNRFF GNARLSYEIT
NWLSANLRVG TDSYNDKRKY KVAFYTNGTP FGSYTEDNYV VQETNIEFTL NAKKKINSDF
TIDGLVGVNE RTNQFEQNYQ QAPKLAVRDV YTLNNSRDPL ISTSYFSKLR VYSAFASAQL
SFRDWAFLNV TARNDRSSTL PSENNSYFYP SVNAAVVLSD ALGIKSNVLT SLKVRGGWAQ
VGKDADPYQL VNTYPFSQPF GAYPLLTVND KYLKKDLKPE ITKASEFGVE ASFLNDRIHT
DVTYYTSSSY NQILLADVSA TTGYLKKLLN AGKINNHGVE VTLGGTPITT PSGFLWNINF
NYAKNISKVI ELDQEGYLND YVLGSSGNIQ VLASKGKRYG ALYGKAYARD AQGRILVNAN
GTPQIANDKK VLGYYTPKWT GSVNNDFSFK GFTLGFLIDT RQGGSIWSGT NYTGIYTGVL
AASLPGRDAE HGGLPYYYAG NNTNGTAVKL ADHNAAAPNG ETVYHDGIVF DGVTADGKQN
EAILPAQRYY KSVYSSSLNE SSVYSASFIK LREVRLGYAL PQELIKKWGL QAVNLTVTAR
NLWYIDKKVP NIDPETAFNT GNGQGLETLQ IPTTRSLGLN LRVSF
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