| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1445 |
|---|
| Symbol | |
|---|
| ID | 8357586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1758920 |
|---|
| End bp | 1760119 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963625 |
|---|
| Product | glycosyltransferase, MGT family |
|---|
| Protein accession | YP_003121143 |
|---|
| Protein GI | 256420490 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | [TIGR01426] glycosyltransferase, MGT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAT TTATGTTCGT AGTGCCGCCA TTCTTTGGGC ACATCAGTCC TACCCTGAGT
GTGGGTGGCA GTTTGCTGGC CCGGGGTCAT GAAGTGATAT GGGTAGGCTT GAAAGAACTC
GGAGCAGAAC ATATCCCTGC CGGCGGACAA TTCATTGTAC CGCACAAAGA ACTCGCGCCT
TACCAATCTG CTATACAGGC CATACTCAAG CTACAGGATG AAGGCCCGAA ACTGTCAGGT
GTGGAAACAT TGAAACTGGC GCTGGAAGAT ACCTATATCC CGTTTGCAAA ATATATGCTG
GCAGGTGTAT CGGGAATAGC AGATGAATTC AGACCTGATG TAATCATCAG TGACTGTATC
ACCTTTGCCG GAGCACTATG CGCACATATT AAAGATATTC CCTGTGTAAC GACGACACCG
GTGCCTCCTG ATGTAACAGG AGATGCCATG CAGTCGCCGA AGATATTTGA ATGGCAGCAA
AACCTGATCA GATCATTACA ACGTGAGGTA GGCATCTATA CGGATGAATA TGTGATCCAT
TCCCGGGAGA TGAACATTGT ATTCACCTCA CAGGAGTTTG CAGGTAGTAA AGATCCGCTG
CCTCATATGC GTTTTGTAGG ACCGGTAAAG GGCAGGCCCA ATAATACGCC TTTTGACTGG
GATCAGCTGG CAAGAGTCAT GTCACCGAAA GTATTTGTAT CACTGGGTAC ATTGCTGGTA
GATATCAGGA AAGAGTTCTT TCAGAAACTG ATAGACGCAT TTGCGGATGA ACCTATTACC
ATCGTAGCGG CGACTGACCC GGCTATCTTT CCGCAATGGC CGGACAATTT TATCGTACAG
GGCTTTGTGC CACAATCGGA ATTAATGCCA CATATGCATG CGGTGATCTG TCATGGTGGT
TTTAATACCG TGAATGATGC TTTTGTGAAC GGATTGCCCA TGCTGATCAC CCCTATCGCC
TACGACCATT TCCATACCGC TTCCCTGATT GAAAATGCAG GCTGCGGAAT CAAATTACGT
TATAAAAGAC TACGCGTCCC TGATCTGAAA GCGGCGATGT GGGAGGTACT GGACAATCCA
AAGTACCGGA AATCAGCACA ATATATCAGG GAGACATTTA TCAAAGCCGG CGGCAACGAC
AAAGCGGTCG CATTACTGGA AACATTTGCA AAGGAGAAAC AAAGTACCCT ATCTGTTTAA
|
|---|
| Protein sequence | MSKFMFVVPP FFGHISPTLS VGGSLLARGH EVIWVGLKEL GAEHIPAGGQ FIVPHKELAP
YQSAIQAILK LQDEGPKLSG VETLKLALED TYIPFAKYML AGVSGIADEF RPDVIISDCI
TFAGALCAHI KDIPCVTTTP VPPDVTGDAM QSPKIFEWQQ NLIRSLQREV GIYTDEYVIH
SREMNIVFTS QEFAGSKDPL PHMRFVGPVK GRPNNTPFDW DQLARVMSPK VFVSLGTLLV
DIRKEFFQKL IDAFADEPIT IVAATDPAIF PQWPDNFIVQ GFVPQSELMP HMHAVICHGG
FNTVNDAFVN GLPMLITPIA YDHFHTASLI ENAGCGIKLR YKRLRVPDLK AAMWEVLDNP
KYRKSAQYIR ETFIKAGGND KAVALLETFA KEKQSTLSV
|
|---|
| |