Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1435 |
Symbol | |
ID | 8357576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1748010 |
End bp | 1748897 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644963615 |
Product | Beta-lactamase |
Protein accession | YP_003121133 |
Protein GI | 256420480 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC GTATCCTATC GTGCTCCTTA GCACTGCCGT TCCTGTTGTT AAGTATACAC AGCTCCGCAC AGGACAACAA TACCAGACAA AAAGTAAATG AAATTGCTGC TACCGCCCGT GGACATGTGG GTGTGGCGAT GATGTCCCTG GAAAACGGAG ACACCATGAC GCTCAACGGA AATGATCACT TCCCGATGCA GAGCGTATTT AAAGTACCCC TGGCCATCGC TGTACTGGAT CAGGTAGATA AAGGTAAACT GTCACTTGAC CAGGTGATTC ATATCACGAA GAAAGAATTA CTGCCTTTTA CGTGGAGCCC GATAAGAGAA AAATATCCGG AAGGAACAGA CCTGAAGCTG AGAGAAGTAT TGGCTTATAC CGTATCGCAG AGTGATAACA ACGGTTGTGA TATTTTATTT AACCTCGTAG GTGGTACCGC TTACGTTGAA CAATATATCC ATGGCCTGGG TGTTGATAGC ATGGCTATCA AGGCGAATGA AGAAAGAATG GCATCTGCAT GGAAAGTACA ATATACCAAC TGGAGCTCAC CACTGGCTAC ATTGCAATTA CTGAAAGGTA TCCATACCGG AAAATACCTG TCTAAAGCCA GCAATGACTT CCTGTTGAAG ATCATGAAAG AAACGACTAC TGGTCCTAAG AGACTGAGAG GCATGTTGCC TGCAGACGCG GTAGTTGCAC ATAAAACAGG TTCTTCTGAT ACAAAAGACG GTTTAACTGC TGCTACCAAT GATGCCGGTA TTGTTACATT ACCTGACGGA TCACATTTAG CGATCGTTGT TTTTGTCAGC GATACTAAGG TGAATGAAGC GATCAGAGAA GGTGTGATCG CCAGGATTAC CCGCCTTTTC TGGGACGCTG CTAACTAA
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Protein sequence | MKNRILSCSL ALPFLLLSIH SSAQDNNTRQ KVNEIAATAR GHVGVAMMSL ENGDTMTLNG NDHFPMQSVF KVPLAIAVLD QVDKGKLSLD QVIHITKKEL LPFTWSPIRE KYPEGTDLKL REVLAYTVSQ SDNNGCDILF NLVGGTAYVE QYIHGLGVDS MAIKANEERM ASAWKVQYTN WSSPLATLQL LKGIHTGKYL SKASNDFLLK IMKETTTGPK RLRGMLPADA VVAHKTGSSD TKDGLTAATN DAGIVTLPDG SHLAIVVFVS DTKVNEAIRE GVIARITRLF WDAAN
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