Gene Cpin_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1435 
Symbol 
ID8357576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1748010 
End bp1748897 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content45% 
IMG OID644963615 
ProductBeta-lactamase 
Protein accessionYP_003121133 
Protein GI256420480 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC GTATCCTATC GTGCTCCTTA GCACTGCCGT TCCTGTTGTT AAGTATACAC 
AGCTCCGCAC AGGACAACAA TACCAGACAA AAAGTAAATG AAATTGCTGC TACCGCCCGT
GGACATGTGG GTGTGGCGAT GATGTCCCTG GAAAACGGAG ACACCATGAC GCTCAACGGA
AATGATCACT TCCCGATGCA GAGCGTATTT AAAGTACCCC TGGCCATCGC TGTACTGGAT
CAGGTAGATA AAGGTAAACT GTCACTTGAC CAGGTGATTC ATATCACGAA GAAAGAATTA
CTGCCTTTTA CGTGGAGCCC GATAAGAGAA AAATATCCGG AAGGAACAGA CCTGAAGCTG
AGAGAAGTAT TGGCTTATAC CGTATCGCAG AGTGATAACA ACGGTTGTGA TATTTTATTT
AACCTCGTAG GTGGTACCGC TTACGTTGAA CAATATATCC ATGGCCTGGG TGTTGATAGC
ATGGCTATCA AGGCGAATGA AGAAAGAATG GCATCTGCAT GGAAAGTACA ATATACCAAC
TGGAGCTCAC CACTGGCTAC ATTGCAATTA CTGAAAGGTA TCCATACCGG AAAATACCTG
TCTAAAGCCA GCAATGACTT CCTGTTGAAG ATCATGAAAG AAACGACTAC TGGTCCTAAG
AGACTGAGAG GCATGTTGCC TGCAGACGCG GTAGTTGCAC ATAAAACAGG TTCTTCTGAT
ACAAAAGACG GTTTAACTGC TGCTACCAAT GATGCCGGTA TTGTTACATT ACCTGACGGA
TCACATTTAG CGATCGTTGT TTTTGTCAGC GATACTAAGG TGAATGAAGC GATCAGAGAA
GGTGTGATCG CCAGGATTAC CCGCCTTTTC TGGGACGCTG CTAACTAA
 
Protein sequence
MKNRILSCSL ALPFLLLSIH SSAQDNNTRQ KVNEIAATAR GHVGVAMMSL ENGDTMTLNG 
NDHFPMQSVF KVPLAIAVLD QVDKGKLSLD QVIHITKKEL LPFTWSPIRE KYPEGTDLKL
REVLAYTVSQ SDNNGCDILF NLVGGTAYVE QYIHGLGVDS MAIKANEERM ASAWKVQYTN
WSSPLATLQL LKGIHTGKYL SKASNDFLLK IMKETTTGPK RLRGMLPADA VVAHKTGSSD
TKDGLTAATN DAGIVTLPDG SHLAIVVFVS DTKVNEAIRE GVIARITRLF WDAAN