Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1398 |
Symbol | |
ID | 8357518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1666960 |
End bp | 1668156 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644963557 |
Product | Phosphoglycerate kinase |
Protein accession | YP_003121096 |
Protein GI | 256420443 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAT TCTCCGACTT TAACTTTAGT GGCCATAAAG CAGTGGTGCG CGTAGATTTC AACGTGCCCC TTAATGATAA ATTTGAGATC ACGGATGATA CCCGTATGAC CGCCGCTGTA CCAACTATCA GGAAAATCCT GAAAGATGGT GGTAGCGTAA TCCTGATGTC TCACCTGGGC CGCCCGAAAG ATGGTCCTAC TGACAAATAC TCCCTGAAAC ACCTGGTATA TCACCTGGTA AAATTACTGG ATGGCGCCAC CGTGAAATTC GCGGAAGATT GCATCGGTCC CGTAGCAGAA GAAGCAGCTG CAAAACTGCA GTCCGGAGAA GTACTCCTGC TCGAAAACCT GCGCTTCCAT AAAGAAGAAG AAAAAGGTGA CAAAGCCTTC GCTGAAAAAT TATCCAAACT GGGTGATGTA TATGTGAATG ATGCCTTCGG TACCGCTCAC CGTGCACATG CTTCTACAGC GGTAATCGCT GAATTCTATG CTGCTGACAA ACGTATGTTC GGTCTGCTGA TGGAAGCTGA AGTTAGCAAT GGCGAGAAAG TACTGAGCGG TTCCGGTACT CCATTTACCG CTATCCTGGG TGGTGCTAAA GTGAGCGACA AGATCCTGAT CATCGAAAAC CTGATGGAAA AAGCAAATAA CATCATCATC GGTGGTGGTA TGGCTTACAC CTTCCTGAAA GCACTGGGTA AAGAGATCGG TAGCTCCCTC TGCGAAAATG ATAAACTGGA CCTGGCACTC GAACTGCTGG CTAAAGCCAA AGCAAAAGGT GTGCAGCTGA TCCTGCCTGT TGACTCAGTA GCTGCTGATA AGTTTGCCGC TGATGCCAAC ACCCAGATCG TTAGTAATGA CAATATCCCA GCCGGTTGGA TGGGGCTGGA TATAGGAGAG AAATCCGTTG CGCTGTTCAG CGAAACAATC CAGCAGTCCA AAACTATCCT CTGGAATGGT CCAATGGGCG TATTCGAAAT GAAAGCTTTC CAGAACGGTA CCAAAGCGGT TGCCGACGCT ATCGTACTGG CTACCGCACA GGGTGCATTC TCCCTGGTAG GTGGTGGTGA CTCCGTAGCT GCTGTAAACC AGTTCGGTCT GGCTGAAAAA GTAAGCTACG TATCTACCGG TGGTGGTGCA CTGCTCGAAT TCTTCGAAGG TAAAACCCTT CCTGGTATCG CTGCTATCAA AGGCTAA
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Protein sequence | MSQFSDFNFS GHKAVVRVDF NVPLNDKFEI TDDTRMTAAV PTIRKILKDG GSVILMSHLG RPKDGPTDKY SLKHLVYHLV KLLDGATVKF AEDCIGPVAE EAAAKLQSGE VLLLENLRFH KEEEKGDKAF AEKLSKLGDV YVNDAFGTAH RAHASTAVIA EFYAADKRMF GLLMEAEVSN GEKVLSGSGT PFTAILGGAK VSDKILIIEN LMEKANNIII GGGMAYTFLK ALGKEIGSSL CENDKLDLAL ELLAKAKAKG VQLILPVDSV AADKFAADAN TQIVSNDNIP AGWMGLDIGE KSVALFSETI QQSKTILWNG PMGVFEMKAF QNGTKAVADA IVLATAQGAF SLVGGGDSVA AVNQFGLAEK VSYVSTGGGA LLEFFEGKTL PGIAAIKG
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