Gene Cpin_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1398 
Symbol 
ID8357518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1666960 
End bp1668156 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content49% 
IMG OID644963557 
ProductPhosphoglycerate kinase 
Protein accessionYP_003121096 
Protein GI256420443 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAT TCTCCGACTT TAACTTTAGT GGCCATAAAG CAGTGGTGCG CGTAGATTTC 
AACGTGCCCC TTAATGATAA ATTTGAGATC ACGGATGATA CCCGTATGAC CGCCGCTGTA
CCAACTATCA GGAAAATCCT GAAAGATGGT GGTAGCGTAA TCCTGATGTC TCACCTGGGC
CGCCCGAAAG ATGGTCCTAC TGACAAATAC TCCCTGAAAC ACCTGGTATA TCACCTGGTA
AAATTACTGG ATGGCGCCAC CGTGAAATTC GCGGAAGATT GCATCGGTCC CGTAGCAGAA
GAAGCAGCTG CAAAACTGCA GTCCGGAGAA GTACTCCTGC TCGAAAACCT GCGCTTCCAT
AAAGAAGAAG AAAAAGGTGA CAAAGCCTTC GCTGAAAAAT TATCCAAACT GGGTGATGTA
TATGTGAATG ATGCCTTCGG TACCGCTCAC CGTGCACATG CTTCTACAGC GGTAATCGCT
GAATTCTATG CTGCTGACAA ACGTATGTTC GGTCTGCTGA TGGAAGCTGA AGTTAGCAAT
GGCGAGAAAG TACTGAGCGG TTCCGGTACT CCATTTACCG CTATCCTGGG TGGTGCTAAA
GTGAGCGACA AGATCCTGAT CATCGAAAAC CTGATGGAAA AAGCAAATAA CATCATCATC
GGTGGTGGTA TGGCTTACAC CTTCCTGAAA GCACTGGGTA AAGAGATCGG TAGCTCCCTC
TGCGAAAATG ATAAACTGGA CCTGGCACTC GAACTGCTGG CTAAAGCCAA AGCAAAAGGT
GTGCAGCTGA TCCTGCCTGT TGACTCAGTA GCTGCTGATA AGTTTGCCGC TGATGCCAAC
ACCCAGATCG TTAGTAATGA CAATATCCCA GCCGGTTGGA TGGGGCTGGA TATAGGAGAG
AAATCCGTTG CGCTGTTCAG CGAAACAATC CAGCAGTCCA AAACTATCCT CTGGAATGGT
CCAATGGGCG TATTCGAAAT GAAAGCTTTC CAGAACGGTA CCAAAGCGGT TGCCGACGCT
ATCGTACTGG CTACCGCACA GGGTGCATTC TCCCTGGTAG GTGGTGGTGA CTCCGTAGCT
GCTGTAAACC AGTTCGGTCT GGCTGAAAAA GTAAGCTACG TATCTACCGG TGGTGGTGCA
CTGCTCGAAT TCTTCGAAGG TAAAACCCTT CCTGGTATCG CTGCTATCAA AGGCTAA
 
Protein sequence
MSQFSDFNFS GHKAVVRVDF NVPLNDKFEI TDDTRMTAAV PTIRKILKDG GSVILMSHLG 
RPKDGPTDKY SLKHLVYHLV KLLDGATVKF AEDCIGPVAE EAAAKLQSGE VLLLENLRFH
KEEEKGDKAF AEKLSKLGDV YVNDAFGTAH RAHASTAVIA EFYAADKRMF GLLMEAEVSN
GEKVLSGSGT PFTAILGGAK VSDKILIIEN LMEKANNIII GGGMAYTFLK ALGKEIGSSL
CENDKLDLAL ELLAKAKAKG VQLILPVDSV AADKFAADAN TQIVSNDNIP AGWMGLDIGE
KSVALFSETI QQSKTILWNG PMGVFEMKAF QNGTKAVADA IVLATAQGAF SLVGGGDSVA
AVNQFGLAEK VSYVSTGGGA LLEFFEGKTL PGIAAIKG