| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1395 |
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| Symbol | |
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| ID | 8357514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1660619 |
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| End bp | 1665010 |
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| Gene Length | 4392 bp |
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| Protein Length | 1463 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644963553 |
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| Product | YD repeat protein |
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| Protein accession | YP_003121093 |
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| Protein GI | 256420440 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATTA ATCAGTATAT CATAAATATT AAACTATTGG CTGTCGCCAT TATTCTGCCG
GCAAGTTTAT TCGCGCAGAA GCCAGGTGGA AGCCTGGGAG CCGCAACGCC TGTAACTACT
CCTTCTCCAT ATACACATAC CACCATTAAT TATGTAAGAA CCTGGGAGCC GGAGGCGCCG
CTGAAGGATA CGAATGCAAT TACCTCTCCA ACGAGGTTAG TCAGGGAGGT TAAACAAACT
ACTGAATATC TCGACGGTTT AGGACGTGCT ATACAGAGGG TCGCGAAGGG AGTAAGTCCC
AATGGAAGAG ACCTGGTACA AATGTTTATA TACGATCCAT ATGGTCGCGA ACAGTATAGT
TATCTTCAAT ATACTCATCA GGCATCAGGA GATGGTAAAT TTAAGCGGGA TCCTTTTTCT
GCGCAAAACT CTTTTTATAA AAATGGTATT TTAAATCCAG GACTTTCAGG AGAGAATATT
TTTTATACTA AGAAGGAAAT TGAATTATCT CCCTTGGATC GGGAATTAAA AATGTATGCT
CCGGGGAATA GTTGGATAAA TAGACCCGTG GAGACACGTT ATCTGGTAAA TGGAATAGGT
GATTCCGTAA GAATCTGGAC GATGGGATCC ACATTTCCTG TCAGTACTAG TAGTTATGCG
AATGGGCAAT TGAGCAAAAT TGTTTCAATA AATGAGCACG GAAATCAGAC GGTTGAATAT
AAGGATAAAG ATAGCAGGAT TATTCTAAAA AAAATACAGA TCAGTGACGT TCCCTCTACA
GGTGCATTTG GTTGGCTTTG TACTTACTAT GTATATGATG ATATGGGAAA TCTGCGATAT
GTAATTCCTC CTTCTGGGGT AGAAGCAATC AAAGGTAACT GGACCATAAC AGCGGCTGTA
GATACTGGCT TATGCTATCA CTATCAGTAT GACGCTCGTC AGAGGATGAT CGTTAAGCGA
GCGCCAGGAG CTGGTCGTAC TTTATTGGTT TACGATAGCC GTGACAGAGT TGTATTTGCG
CAAGATTCAA TACAGCGGTC CAAGGTGCCA ATGGAGTGGA TAGCAACGTT TTATGATGAT
CTGAATCGTC CGACGATGAC TGCTATTTAT AAAAATACCA TCTCGCTTGA GGATTTACAG
AAGAGTGTCG ATGCCGCAGT TGCTTCAGCA ACGATTTCTT ATGTAGCTCC GGCAAAAGCA
GATTTAGCTG TTTATGAACA TGACGGGAGG TCTTTATACA CGGCAACAAA TAGTATTACA
GTATTTGAAG ACTTTGACTC AGGTAACGGT GAAATGGTTA TGGAAACTAA ACCATCTACA
GGTGATACAA TTTCTTTACT GGCAAACAAT CCACTTCCCA ATATATCTCC TTCTTTATTA
ACGCCATTGG CTTATACTTT TTATGATAAC TATAACTATC CAGGGAAGCT CGCTTTTGTT
GGTCTGGATA CTGCTCAATT GCAGGTCGCA GATACATTAT TCCCGGATAG AAGACCTGTA
ACCAATCTTA CAGATGGTCT GGTTACAGGT GGTAGAGTGA GAGTGTTGGG AACGGATAAT
TGGCTTACGA CGACAAATTA TTACGATGAT AAGGGAAGGG TGCTGCAGCT TATTAGTGAA
AATAATCTTG GAGGTAAAGA TGTCATTTCA ACTCGTTACA GCTTCAAGGG TGTTATTCTC
GCCAGCTATC TACGTCATCA GAATCCGAAA AGTGTAGTTC CTCAGACGAC GGTTCTGACA
AGTATGACTT ATGATAATGG AGGGCGTCTA TTAAATATTA CAAAGAGATT GAATGATGAT
GTCAGTAAGG AGAAAATAAT TGTCTCTAAC AGTTACGATG AGTTGGGACG TATGCGTCTT
AAACGCTTAG GTGTTTCATC ATCAGGAGCC TTGCTTGATA CTTTGAACTA TACTTATAAT
ATACAGGGAT GGCCACTAGG AATTAATCGG AATTTTGTTA ACAGTGGAAA TCTTACATCT
AACTGGTTTG GTCAGGAGAT AAGTTATGAT TACGGTTTTA CAAACAACCA ATATAATGGC
AATATTGCAG GTGTAAAGTG GAAAACAAGG GCAGATAGCA CCTATGCTTA TGGTTATAGC
TATGATAGAG CAAATCGCCT GCTGAGTGCC TTTTTTACGC AAAGAAATGG CGTGAATTGG
TCTCAGGGAA CGAAAGATTT TTCTGTCAGT AATTTGAGTT ACGATGCCAA TGGAAACATT
AAAACCATGT TACAGAAAGG ATTGGTAGGT ACAACTAGCA AAACAATAGA TAGCCTCGTA
TATACCTACT CCGCTAACAG TAACAGGCTG CTAGGTGTAA AGGATGTAGA TTCATCAATT
ACAAAGTCTG CAAAGCTGGG TGACTTCATA GATCTTAATA CTGGTGTTCA GGACTATTAC
TATGATAACA ATGGAAACAT GGTTGCCGAC CAGAACAAAA GAATAACTTC AATTACTTAT
AATCATCTGA ATTTACCGAC TGTAATTACG ATGGTGGGAA AAGGAACGAT TACCTATACA
TATGATGCCG CAGGTCGTAA ATTGTCGAAA ACAGTGATTG ATAATACAGG TAACTCTCCT
AAGACTACTG TCACAGACTA TGTTGGAGCA TTTGTATATA AACAAGATAG TCTTGAATTC
ATAAGTCACG AAGAGGGCAG AATAAGACCT GTTTATAAAA CAGGAGAGTC GGTTCGGTAT
GCTTATGATT ATTTTGAAAA AGATCATCTC GGTAACATCA GGACTGTGCT CACAGACCAG
ACTGACTTTA CTATGTACGC AGCTTCAATG GAAGTGGATG CAGGGGCGAA AGAAGCCGCT
TTATTCAGTA ATATAGAAGA AACAAGGGTA GAAACTCCCA CCGGTTATCC ACAGGATAAT
ACAACAGAAA AAAACAAATC AGTTGCCCGG TTAAATGGTA AGACAGGTGG GAAAAAAATT
GGTCCATCAC TTGTGTTACG GGTAATGGCA GGTGATACTG TACGGGTCAA TGCGCGAGCG
TTTTACAAGT CCCAGGGGCC TAAGGATGAT GATAAACAGG CTCCGGTCGA AGATATGTTG
GCTGGACTTC TACAGGCATT TGGAGGGAAT TCTGTGAGAA ACGGAGAGCA TAATGTTGTA
ATGGTTTCAA ATACAACACC GTTTAATAGT GATTTTTATG GTAACACATA TCAGCGATTA
AAGGAAAAAA ATAATGACAA TGGGCAATCA AATCGTCCCA AGGCATATTT AAATTTTGTA
CTATTTGATG ATGATTTTAA ATTGGTAGAA CAGAATAGTG GTGTACGACA GGTAAAGGCT
AGTCCGGATG AGTTACAGGA ATTGGCGGTA GAGAAGATGA GTGTGGCAAA GAGCGGGTAT
TTATACGTTT ATACAAGTAA TGAAAGTCAG CAGGATGTTT ATTTTGACAA TGTGATTTTA
GGATTAAATA GTGGACCTTT GCTGGAGGAA ACACATTATT ATCCGTTTGG GTTAGTAATG
AAAGGAATCA GCACAAAGGC CGCTGGATCT CTAGGCAATA GAATGAGGTT TAATGGAAAA
GAGGCCCAGA TTGATGAATT TATGGATGGT AGTGGTTTGG AGCAATATGA TTATGGAGCT
AGAAACTATG ACGCCCAATT AGGATTGTGG CATAATATCG ATCCTTTGGC AAATCTCAGC
AGAAGGTGGT CGCCATATGT TTATGCATAT AATAATCCTT TACGTTTTAT AGATCCAGAT
GGGATGTTAC CAGAAGATAA CTTAGACAAA AATAGTGTTG GGATGATGTC AAAGCAATCT
AAAAAAATGA GTTCTGACAA CGCAGTGACG TCTGAGTCTA AAAAAGCATT AGAGAATGTC
CTTAATGAGG ATGCTCTAAT AGAACGTAAA CAGATGGCAA AAAAAATGGA TGAGAACGGA
TCTTTTCTCG ATATGATCTT GGGGGAACAA GGGCCAGGAA AAGGAGCAAA AAAGACTGGT
AGTAAGAAGG AGAACAAAGC TGACCCCGCA CCTGAACCTC AGATTATTTC TCTCGTTAAA
AGAGCACGGG TTGCGCTAAC TAATAATACG GTCCTTGTTA AGATAATGTT TAATGAAAAG
ACAAATAAAA TTGAAAAATT TGATTTTTCA ATAGGAGGTA AGCATGGAGA AATTAAATCT
ATCGGAGACT TCGACCAACA AATTTTCCAG GGGGTGGTCA CCTATAAGTT GTATTTCGAA
GCGACATTAG GAGTAGAAGA ATCTGTATCG GCTGAAATGA CAAAAGAAGG TGGATCTTTT
GGAGCGAAAA TTGGGACGGA GACTAAACAA ACAAGTGGAG AAACACATCA CGTGGTTATT
TATGGTAATA TTTATAAAGG GCAAATAACG TTAAGTGGAT CATTTCTGGC ACCGGAAGAC
ATCGAAGAAT AA
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| Protein sequence | MSINQYIINI KLLAVAIILP ASLFAQKPGG SLGAATPVTT PSPYTHTTIN YVRTWEPEAP
LKDTNAITSP TRLVREVKQT TEYLDGLGRA IQRVAKGVSP NGRDLVQMFI YDPYGREQYS
YLQYTHQASG DGKFKRDPFS AQNSFYKNGI LNPGLSGENI FYTKKEIELS PLDRELKMYA
PGNSWINRPV ETRYLVNGIG DSVRIWTMGS TFPVSTSSYA NGQLSKIVSI NEHGNQTVEY
KDKDSRIILK KIQISDVPST GAFGWLCTYY VYDDMGNLRY VIPPSGVEAI KGNWTITAAV
DTGLCYHYQY DARQRMIVKR APGAGRTLLV YDSRDRVVFA QDSIQRSKVP MEWIATFYDD
LNRPTMTAIY KNTISLEDLQ KSVDAAVASA TISYVAPAKA DLAVYEHDGR SLYTATNSIT
VFEDFDSGNG EMVMETKPST GDTISLLANN PLPNISPSLL TPLAYTFYDN YNYPGKLAFV
GLDTAQLQVA DTLFPDRRPV TNLTDGLVTG GRVRVLGTDN WLTTTNYYDD KGRVLQLISE
NNLGGKDVIS TRYSFKGVIL ASYLRHQNPK SVVPQTTVLT SMTYDNGGRL LNITKRLNDD
VSKEKIIVSN SYDELGRMRL KRLGVSSSGA LLDTLNYTYN IQGWPLGINR NFVNSGNLTS
NWFGQEISYD YGFTNNQYNG NIAGVKWKTR ADSTYAYGYS YDRANRLLSA FFTQRNGVNW
SQGTKDFSVS NLSYDANGNI KTMLQKGLVG TTSKTIDSLV YTYSANSNRL LGVKDVDSSI
TKSAKLGDFI DLNTGVQDYY YDNNGNMVAD QNKRITSITY NHLNLPTVIT MVGKGTITYT
YDAAGRKLSK TVIDNTGNSP KTTVTDYVGA FVYKQDSLEF ISHEEGRIRP VYKTGESVRY
AYDYFEKDHL GNIRTVLTDQ TDFTMYAASM EVDAGAKEAA LFSNIEETRV ETPTGYPQDN
TTEKNKSVAR LNGKTGGKKI GPSLVLRVMA GDTVRVNARA FYKSQGPKDD DKQAPVEDML
AGLLQAFGGN SVRNGEHNVV MVSNTTPFNS DFYGNTYQRL KEKNNDNGQS NRPKAYLNFV
LFDDDFKLVE QNSGVRQVKA SPDELQELAV EKMSVAKSGY LYVYTSNESQ QDVYFDNVIL
GLNSGPLLEE THYYPFGLVM KGISTKAAGS LGNRMRFNGK EAQIDEFMDG SGLEQYDYGA
RNYDAQLGLW HNIDPLANLS RRWSPYVYAY NNPLRFIDPD GMLPEDNLDK NSVGMMSKQS
KKMSSDNAVT SESKKALENV LNEDALIERK QMAKKMDENG SFLDMILGEQ GPGKGAKKTG
SKKENKADPA PEPQIISLVK RARVALTNNT VLVKIMFNEK TNKIEKFDFS IGGKHGEIKS
IGDFDQQIFQ GVVTYKLYFE ATLGVEESVS AEMTKEGGSF GAKIGTETKQ TSGETHHVVI
YGNIYKGQIT LSGSFLAPED IEE
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