Gene Cpin_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1369 
Symbol 
ID8357488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1636091 
End bp1637353 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content45% 
IMG OID644963527 
ProductChloride channel core 
Protein accessionYP_003121067 
Protein GI256420414 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGA AGATTATTCA GTTCAATTAT ATAAAACTTT TTGTTGCTTC TGTTATGGCG 
GGTTTATTAT CAGCCCTCCT CGCAAGCGTA CTGAAGCATA TTACTGAACA TTACGAAGAG
CATTTTTTTA AGACTATCTC CGCTTCCTCC TACCTTTTCC TCATATTCCC GCTGATCGGT
CTGGTACTGA TACATGTACT CCGTAAATAT GCTTTCCGGA AGAAACCCAA CAAGGGTATT
AAAGAGATCT ATCTGACCCT GGACACCCGC CGCAATGAAT TACCCAGCTA TAAAATACCT
TCTCACTTTA TCAATGGTTT TCTGACAGTT ATCTTCGGTG GCTCGACCGG CGTAGAGGTT
TCTACAGTTG TGTCTACTGC TACTATCGGG GCTATGACCA GGCAAAAGGC ATCCATCGCC
AACAGCTATA AAACGGAACT GATCTGTGCT GGTGTAGCTG GTGGTCTGAC AACGCTGTTT
GGCAGTCCAC TGGTAGGTTT ACTATTCGCC GTTGAAGTCA TTGCCCGCAA AGTGACTAAA
ACCATCCTGC TCAGCAGTAT CTCTGCTGTA CTGGCCGCAT GGGGTTTGCT GCAACTGCTT
CATGAAGAGC CCTTCTTAAA GCTCAGCATT ACGCATTGGC AAGTAAGTGC GATCCCTTAC
ATTATCGGAT TGAGTGTGAT AGCTGGTATC ATCTCTGTAT TCTTTACCAA AACAGTCATT
GGTATAAAAC ACCGGTTTGG GACGATAAAA AAAGATTCTA CACGTATTAT TGCCGGGGCA
GCTATTATCG GTACAGGTAT ATTCATCCTG CCAGCATTAT TTGGAGATAG CTATAGCGCA
GTTACTGAAA TGGTTGGACG TTCCCAGCAT GAGGCATTTA CCATTCCTTT CGGTATTACC
CTGCTGGCAA TCGTGTTACT GAAACCAATC ATTTCTTCTG TGACCCTGGG TGCAGGAGGT
GATGGAGGTG TATTTGCGCC AAGCATTGTA ATGGGCGCTC TGTTGGGGTT ATTACTGGCA
ACAGTCTGCA ATCATTACTT CGATAGTCAG CTGATTGTAG CCAATTTCAT CATCATGGGT
ATTGCTGCGG TATTGAGTGG CAGTATACAT GCACCACTGA CATCAACTTC ACTGGCCTGC
CGTTTATCCG GCGGCTTCAT TCTTGCCGTG CCGGTACTGA TCGCCAGTAC AGTGGCCAGG
TATACTGCCA AAAAGATCTA TCCTTATACA GTGTACAGTT ATAAAGACCA GCCGGCTCAG
TAA
 
Protein sequence
MRKKIIQFNY IKLFVASVMA GLLSALLASV LKHITEHYEE HFFKTISASS YLFLIFPLIG 
LVLIHVLRKY AFRKKPNKGI KEIYLTLDTR RNELPSYKIP SHFINGFLTV IFGGSTGVEV
STVVSTATIG AMTRQKASIA NSYKTELICA GVAGGLTTLF GSPLVGLLFA VEVIARKVTK
TILLSSISAV LAAWGLLQLL HEEPFLKLSI THWQVSAIPY IIGLSVIAGI ISVFFTKTVI
GIKHRFGTIK KDSTRIIAGA AIIGTGIFIL PALFGDSYSA VTEMVGRSQH EAFTIPFGIT
LLAIVLLKPI ISSVTLGAGG DGGVFAPSIV MGALLGLLLA TVCNHYFDSQ LIVANFIIMG
IAAVLSGSIH APLTSTSLAC RLSGGFILAV PVLIASTVAR YTAKKIYPYT VYSYKDQPAQ