Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1369 |
Symbol | |
ID | 8357488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1636091 |
End bp | 1637353 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644963527 |
Product | Chloride channel core |
Protein accession | YP_003121067 |
Protein GI | 256420414 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGA AGATTATTCA GTTCAATTAT ATAAAACTTT TTGTTGCTTC TGTTATGGCG GGTTTATTAT CAGCCCTCCT CGCAAGCGTA CTGAAGCATA TTACTGAACA TTACGAAGAG CATTTTTTTA AGACTATCTC CGCTTCCTCC TACCTTTTCC TCATATTCCC GCTGATCGGT CTGGTACTGA TACATGTACT CCGTAAATAT GCTTTCCGGA AGAAACCCAA CAAGGGTATT AAAGAGATCT ATCTGACCCT GGACACCCGC CGCAATGAAT TACCCAGCTA TAAAATACCT TCTCACTTTA TCAATGGTTT TCTGACAGTT ATCTTCGGTG GCTCGACCGG CGTAGAGGTT TCTACAGTTG TGTCTACTGC TACTATCGGG GCTATGACCA GGCAAAAGGC ATCCATCGCC AACAGCTATA AAACGGAACT GATCTGTGCT GGTGTAGCTG GTGGTCTGAC AACGCTGTTT GGCAGTCCAC TGGTAGGTTT ACTATTCGCC GTTGAAGTCA TTGCCCGCAA AGTGACTAAA ACCATCCTGC TCAGCAGTAT CTCTGCTGTA CTGGCCGCAT GGGGTTTGCT GCAACTGCTT CATGAAGAGC CCTTCTTAAA GCTCAGCATT ACGCATTGGC AAGTAAGTGC GATCCCTTAC ATTATCGGAT TGAGTGTGAT AGCTGGTATC ATCTCTGTAT TCTTTACCAA AACAGTCATT GGTATAAAAC ACCGGTTTGG GACGATAAAA AAAGATTCTA CACGTATTAT TGCCGGGGCA GCTATTATCG GTACAGGTAT ATTCATCCTG CCAGCATTAT TTGGAGATAG CTATAGCGCA GTTACTGAAA TGGTTGGACG TTCCCAGCAT GAGGCATTTA CCATTCCTTT CGGTATTACC CTGCTGGCAA TCGTGTTACT GAAACCAATC ATTTCTTCTG TGACCCTGGG TGCAGGAGGT GATGGAGGTG TATTTGCGCC AAGCATTGTA ATGGGCGCTC TGTTGGGGTT ATTACTGGCA ACAGTCTGCA ATCATTACTT CGATAGTCAG CTGATTGTAG CCAATTTCAT CATCATGGGT ATTGCTGCGG TATTGAGTGG CAGTATACAT GCACCACTGA CATCAACTTC ACTGGCCTGC CGTTTATCCG GCGGCTTCAT TCTTGCCGTG CCGGTACTGA TCGCCAGTAC AGTGGCCAGG TATACTGCCA AAAAGATCTA TCCTTATACA GTGTACAGTT ATAAAGACCA GCCGGCTCAG TAA
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Protein sequence | MRKKIIQFNY IKLFVASVMA GLLSALLASV LKHITEHYEE HFFKTISASS YLFLIFPLIG LVLIHVLRKY AFRKKPNKGI KEIYLTLDTR RNELPSYKIP SHFINGFLTV IFGGSTGVEV STVVSTATIG AMTRQKASIA NSYKTELICA GVAGGLTTLF GSPLVGLLFA VEVIARKVTK TILLSSISAV LAAWGLLQLL HEEPFLKLSI THWQVSAIPY IIGLSVIAGI ISVFFTKTVI GIKHRFGTIK KDSTRIIAGA AIIGTGIFIL PALFGDSYSA VTEMVGRSQH EAFTIPFGIT LLAIVLLKPI ISSVTLGAGG DGGVFAPSIV MGALLGLLLA TVCNHYFDSQ LIVANFIIMG IAAVLSGSIH APLTSTSLAC RLSGGFILAV PVLIASTVAR YTAKKIYPYT VYSYKDQPAQ
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