Gene Cpin_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1337 
SymbolfabG 
ID8357455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1596290 
End bp1597006 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content48% 
IMG OID644963495 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003121036 
Protein GI256420383 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.541378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAA TAAAAGGAAA AAACGCCCTC GTAACAGGTG CCGGAAAAGG AATCGGGAAG 
GCAGTTGCCA AACAACTGGC CGCTGAAGGA GTGAACCTGG CATTGTTAGC GCGTACCGAG
AAAGACCTGC AGGCAGTAGC GGAAGAACTG AAGGGCACAG GTGTGAAGGT AGTCTATGCT
ACCGCAGATG TTGCTGAAAG AAAAGAAGTA GAAGCTGCAA TAGAAAAGAT GACGGCTGAA
CTGGGTAGCA TCGATATTCT GATCAATAAC GCCGGTATCG GGAAGTTTGG AAAGTTCCTG
GAACTGGAGC CGGAAGAGTG GGAGCAGGTC GTTAAAGTAA ACCTTTTCGG CGCCTATTAT
GTTGTACGTA CAGTACTGCC TGGTATGTTA TCCCGTCAGA CAGGCGATAT CGTTAATATC
TCATCTACAG CAGGTCAGAA AGGCGCTCCG GTAACCAGTG CTTACAGTGC TTCCAAATTC
GGACTGATCG GTATGTCTGA GTCCCTAATG CAGGAAGTAC GTAAGTCTAA TATCAGGGTG
ACTACTTTAA CGCCAAGCAC CATTGCGACA GATATGGCTA TAGACCTGAA ACTGACAGAT
GGCAATCCGG AAAAAGTGAT GCAGGCGGAA GATTTTGCCG AGCTGATCGT GATGCAGCTG
AAGCTAAACA GACGTACCTT TGTAAAAGAA GCGGGATTAT GGTCAACCAA CCCGTGA
 
Protein sequence
MESIKGKNAL VTGAGKGIGK AVAKQLAAEG VNLALLARTE KDLQAVAEEL KGTGVKVVYA 
TADVAERKEV EAAIEKMTAE LGSIDILINN AGIGKFGKFL ELEPEEWEQV VKVNLFGAYY
VVRTVLPGML SRQTGDIVNI SSTAGQKGAP VTSAYSASKF GLIGMSESLM QEVRKSNIRV
TTLTPSTIAT DMAIDLKLTD GNPEKVMQAE DFAELIVMQL KLNRRTFVKE AGLWSTNP