| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1334 |
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| Symbol | |
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| ID | 8357452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1590515 |
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| End bp | 1591870 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963492 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003121033 |
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| Protein GI | 256420380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAA TCTTTTTACT ACTGCTGTTG CCATCGCTGG GTGCAGTGCA AATGAGAGCG
ATTGGTGGCA ATAGTGTACC TAAAGAGATG GTTACTCCAT ATGGGGGACC GGATACTACG
GTACTGAACC ACAAAGTACG TCTGCCAAAG GACACAATTG TCGTGCCTTC CGCAACGTCA
CAGGCTGTGC GAAAAAATGC GCAAAGCCTT CCGTCCAGCA TCAGCAGCCC GAAGGTCTAT
GAACAGATCA ACAACAACAT TGTAGCTGGA TACATCAATA ACTTTGCCAG CAGGTATAGC
CAACACCTGC AGGTAATGGT GTCCAGAGGG CAACCTTACT TCGTAATGGT GGAGAAAATC
TTCAGAGAAC ACGGGATTCC CGAGGAAATG AAGTATCTCG CCGTCATCGA ATCCTCCTTT
AATACCAACG CTCGTTCCCG CGTAGGTGCA GTAGGAGCCT GGCAGTTCAT GTCAGGTACT
GCGCGTATCT TCGGTCTCAG TGTGGGTAAA AAAGTGGACG AAAGAAAAGA CTTCTATAAG
TCTACAGTGG CTGCTGCCAA GTTCCTGAAC GAACTGTACA ATCAGTTCGG TGACTGGTTA
CTCGTAGTAG CTGCCTATAA CTGCGGTCCT GGTGGCGTAC AACGTGCCAT GAACGCAAGT
GGTCGCAGCG ACTTCTGGGG TATGCAATAC TTCCTGCCAG CTGAATCCCG CAACCACGTT
TACAAATTCA TCGCTACCGG TTACATCCTC GACAGATTTA ACAACTTCTT CGGCGTAGGT
AACGATATGA GCAACACAGT TGTTGCAGTT CCTGCTCCTA CCGGCGCAGC TTATGCTACA
ACTGAGCTTT CAGAAGAAGA AATGTTCAAC ACAGTCGAAT TCAATATCTC CGGCAAATAC
CGCCTAGATG CTATTGCCAG AAAGCTGAAT ATGGAACTTT CCGACCTGGA ACACCTCAAC
CCTGATTTCT CTAAAATGAT GTCAGGACCT GAAAATAGCT ACGACCTGAG AATTCCGAAA
GAGAAAATGA AGGAATTCCA GACAGAGAAA GAGGAAATAC TGAAGGAATC ATTACAGATG
ATGCTGGATG ACAAAGCAAC CGCCTTCGAT AAATCCCGCT TCCCTGCTCC GGCAAAAGTA
GCTGCTCCAG CTGAGGCGAA AGCAAAGAAA CCACTGACCA CTACTACAAC AGCGAAAGCC
TCAAAAACTT CAAAATCTTC TGCGAAAGCG AAAGCAACAG CAAAAGGAAA GGCGAAAGCG
CCAACCGCGA AGAAAAAGAC AGTTGCCAAG AAAACAACTG CTAAAAAACC GGTAACAGCG
AAGAAGCCAA CTTTGAAGAA AACAACGCTG CATTAA
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| Protein sequence | MRKIFLLLLL PSLGAVQMRA IGGNSVPKEM VTPYGGPDTT VLNHKVRLPK DTIVVPSATS
QAVRKNAQSL PSSISSPKVY EQINNNIVAG YINNFASRYS QHLQVMVSRG QPYFVMVEKI
FREHGIPEEM KYLAVIESSF NTNARSRVGA VGAWQFMSGT ARIFGLSVGK KVDERKDFYK
STVAAAKFLN ELYNQFGDWL LVVAAYNCGP GGVQRAMNAS GRSDFWGMQY FLPAESRNHV
YKFIATGYIL DRFNNFFGVG NDMSNTVVAV PAPTGAAYAT TELSEEEMFN TVEFNISGKY
RLDAIARKLN MELSDLEHLN PDFSKMMSGP ENSYDLRIPK EKMKEFQTEK EEILKESLQM
MLDDKATAFD KSRFPAPAKV AAPAEAKAKK PLTTTTTAKA SKTSKSSAKA KATAKGKAKA
PTAKKKTVAK KTTAKKPVTA KKPTLKKTTL H
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