Gene Cpin_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1315 
Symbol 
ID8357433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1571743 
End bp1572840 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content42% 
IMG OID644963473 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_003121014 
Protein GI256420361 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA ACCGTATCAG GATCTTGTAC ATTGATGATG AAATTCATAA CCTCAATGCT 
TTTAAAGCCG GATTCCGCAG AAGTTATGAA ATTTATACCG CCAATTCCGC CCAGGAAGGC
AAACAACTAC TTAAAAGCAT TGACGTCCAT ATTATCATTG CGGACCAGAA GATGCCCGTA
TCGACAGGGG TTGAATTCTT TAATGAAATA AAGGATACCC TGCCGGATCC TATGCGTATT
CTCCTGACAG GTTATACCGA TGTGGAAGAT ATTATAGACG CCATCAATAA AGGTCATATC
TTCTCCTATA TCAAAAAACC ATGGGACGAG ATAGAACTGC ATCGTACCAT CAACAACGCC
TTTGAAATTT ATAATACACG CCGCCAGCTG AAAGAAAAGA TCCTTGAGCT GGAAAAGATC
AATGACGAGT TAAACCGCTT TATCTATTCC ACCTCCCATG ACCTTCGCTC TCCGCTGATG
TCCGTATTGG GTATTATCAA TCTGAGCAGG CTGGATAACT CGGTAACAGA TCCGAATGGT
TATCTCAATA TGATTGAGGT ATGTATTCTG AAACTCGACG GATTTATCCA GAAGATCATC
GAATACTACC GGAACTCACG CCTGGATGTA GAGTATGAGA AGATCAACTT CGAAAACCTG
ATCCATGAAT GTATCGCGTC CTTCCGTCAC CAGAACAACG CAATACAGTT CCAGGTGAAT
GTAGACCAGC AGGTAGATTT TAAAGGCGAT ACTTTCCGCA TCAGTGTTAT CCTGAATAAC
CTGATCTCTA ACGCGGTGAA GTACCAGAAA CCGGAAGAAA GTCATCCGCA GGTGAACCTG
TCTGTAAAGG TAGAGCCGCA TAAAGCGACC CTGTCTATTG AAGATAATGG CATCGGTATA
TTGAGCGAAC ACCTGAACAA TATTTTTAAA ATGTTCTTCC GCTCCAAAAA CAATAACAAG
CCAGGCAGTG GTATTGGATT GTATATCGTG AAAGAAGCGC TGAATAAAAT TGGCGGTACT
ATTAACGTTG AGTCAAAGTA TGGAGAAGGT ACCCTATTTG AAATAAGCAT TCCCAACAGA
AATGATTTCG ATTCCTGA
 
Protein sequence
MKDNRIRILY IDDEIHNLNA FKAGFRRSYE IYTANSAQEG KQLLKSIDVH IIIADQKMPV 
STGVEFFNEI KDTLPDPMRI LLTGYTDVED IIDAINKGHI FSYIKKPWDE IELHRTINNA
FEIYNTRRQL KEKILELEKI NDELNRFIYS TSHDLRSPLM SVLGIINLSR LDNSVTDPNG
YLNMIEVCIL KLDGFIQKII EYYRNSRLDV EYEKINFENL IHECIASFRH QNNAIQFQVN
VDQQVDFKGD TFRISVILNN LISNAVKYQK PEESHPQVNL SVKVEPHKAT LSIEDNGIGI
LSEHLNNIFK MFFRSKNNNK PGSGIGLYIV KEALNKIGGT INVESKYGEG TLFEISIPNR
NDFDS